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十二烷基硫酸钠对来自地衣芽孢杆菌的重组γ-谷氨酰转肽酶的酶催化作用和构象的影响

Effects of Sodium Dodecyl Sulfate on the Enzyme Catalysis and Conformation of a Recombinant γ-Glutamyltranspeptidase from Bacillus licheniformis.

作者信息

Chi Meng-Chun, Lu Bo-Yuan, Huang Yu-Fen, Wang Shih-Wei, Lin Min-Guan, Wang Tzu-Fan

机构信息

Department of Applied Chemistry, National Chiayi University, 300 Syuefu Road, Chiayi City, 60004, Taiwan.

Institute of Molecular Biology, Academia Sinica, Nangang District, Taipei City, 11529, Taiwan.

出版信息

Protein J. 2023 Feb;42(1):64-77. doi: 10.1007/s10930-023-10095-8. Epub 2023 Feb 4.

Abstract

The study of interactions between proteins and surfactants is of relevance in a diverse range of applications including food, enzymatic detergent formulation, and drug delivery. In spite of sodium dodecyl sulfate (SDS)-induced unfolding has been studied in detail at the protein level, deciphering the conformation-activity relationship of a recombinant γ-glutamyltranspeptidase (BlrGGT) from Bacillus licheniformis remains important to understand how the transpeptidase activity is related to its conformation. In this study, we examined the enzyme catalysis and conformational transition of BlrGGT in the presence of SDS. Enzymatic assays showed that the transpeptidase activity of BlrGGT was greatly affected by SDS in a concentration-dependent manner with approximately 90% inactivation at 6 mM. Native polyacrylamide gel electrophoresis of SDS-treated samples clearly revealed that the heterodimeric enzyme was apparently dissociated into two different subunits at concentrations above 2 mM. The study of enzyme kinetics showed that SDS can act as a mixed-type inhibitor to reduce the catalytic efficiency of BlrGGT. Moreover, the t value of the enzyme at 55 °C was greatly reduced from 495.1 min to 7.4 min in the presence of 1 mM SDS. The I/I ratio of pyrene excimer fluorescence emission changed around 3.7 mM SDS in the absence of BlrGGT and the inflection point of enzyme samples was reduced to less than 2.7 mM. The Far-UV CD spectrum of the native enzyme had two negative peaks at 208 and 222 nm, respectively; however, both negative peaks increased in magnitude with increasing SDS concentration and reached maximal values at above 4.0 mM. The intrinsic fluorescence spectra of tryptophan further demonstrated that the SDS-induced enzyme conformational transition occurred at approximately 5.1 mM. Tween 20 significantly suppressed the interaction of BlrGGT with SDS by forming mixed micelles at a molar ratio of 1.0. Taken together, this study definitely promotes our better understanding of the relationship between the conformation and catalysis of BlrGGT.

摘要

蛋白质与表面活性剂之间相互作用的研究在包括食品、酶洗涤剂配方和药物递送在内的各种应用中都具有重要意义。尽管在蛋白质水平上已经对十二烷基硫酸钠(SDS)诱导的去折叠进行了详细研究,但解析地衣芽孢杆菌重组γ-谷氨酰转肽酶(BlrGGT)的构象-活性关系对于理解转肽酶活性与其构象之间的关系仍然很重要。在本研究中,我们研究了在SDS存在下BlrGGT的酶催化和构象转变。酶活性测定表明,BlrGGT的转肽酶活性受到SDS的显著影响,呈浓度依赖性,在6 mM时约90%失活。SDS处理样品的天然聚丙烯酰胺凝胶电泳清楚地显示,在浓度高于2 mM时,异二聚体酶明显解离为两个不同的亚基。酶动力学研究表明,SDS可以作为混合型抑制剂降低BlrGGT的催化效率。此外,在1 mM SDS存在下,该酶在55°C时的t值从495.1分钟大幅降至7.4分钟。在没有BlrGGT的情况下,芘激基荧光发射的I/I比值在约3.7 mM SDS处发生变化,而酶样品的拐点降至小于2.7 mM。天然酶的远紫外圆二色光谱在208和222 nm处分别有两个负峰;然而,随着SDS浓度的增加,两个负峰的幅度都增大,并在高于4.0 mM时达到最大值。色氨酸的内在荧光光谱进一步证明,SDS诱导的酶构象转变发生在约5.1 mM。吐温20通过以1.0的摩尔比形成混合胶束,显著抑制了BlrGGT与SDS的相互作用。综上所述,本研究无疑有助于我们更好地理解BlrGGT的构象与催化之间的关系。

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