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γ-谷氨酰转肽酶的成熟机制:来自地衣芽孢杆菌该酶前体模拟物晶体结构及定点诱变研究的见解

The maturation mechanism of γ-glutamyl transpeptidases: Insights from the crystal structure of a precursor mimic of the enzyme from Bacillus licheniformis and from site-directed mutagenesis studies.

作者信息

Pica Andrea, Chi Meng-Chun, Chen Yi-Yu, d'Ischia Marco, Lin Long-Liu, Merlino Antonello

机构信息

Department of Chemical Sciences, University of Naples Federico II, Via Cintia, Naples I-80126, Italy; Istituto di Biostrutture e Bioimmagini, CNR, Via Mezzocannone, 16, Naples 80133, Italy.

Department of Applied Chemistry, National Chiayi University, 300 Syuefu Road, Chiayi City 60004, Taiwan.

出版信息

Biochim Biophys Acta. 2016 Feb;1864(2):195-203. doi: 10.1016/j.bbapap.2015.10.006. Epub 2015 Oct 30.

Abstract

γ-Glutamyl transpeptidases (γ-GTs) are members of N-terminal nucleophile hydrolase superfamily. They are synthetized as single-chain precursors, which are then cleaved to form mature enzymes. Basic aspects of autocatalytic processing of these pro-enzymes are still unknown. Here we describe the X-ray structure of the precursor mimic of Bacillus licheniformis γ-GT (BlGT), obtained by mutating catalytically important threonine to alanine (T399A-BlGT), and report results of autoprocessing of mutants of His401, Thr415, Thr417, Glu419 and Arg571. Data suggest that Thr417 is in a competent position to activate the catalytic threonine (Thr399) for nucleophilic attack of the scissile peptide bond and that Thr415 plays a major role in assisting the process. On the basis of these new structural results, a possible mechanism of autoprocessing is proposed. This mechanism, which guesses the existence of a six-membered transition state involving one carbonyl and two hydroxyl groups, is in agreement with all the available experimental data collected on γ-GTs from different species and with our new Ala-scanning mutagenesis data.

摘要

γ-谷氨酰转肽酶(γ-GTs)是N端亲核水解酶超家族的成员。它们作为单链前体合成,然后被切割形成成熟的酶。这些酶原自催化加工的基本方面仍然未知。在这里,我们描述了通过将具有催化重要性的苏氨酸突变为丙氨酸(T399A-BlGT)获得的地衣芽孢杆菌γ-GT(BlGT)前体模拟物的X射线结构,并报告了His401、Thr415、Thr417、Glu419和Arg571突变体的自加工结果。数据表明,Thr417处于激活催化苏氨酸(Thr399)以对可裂解肽键进行亲核攻击的合适位置,并且Thr415在协助该过程中起主要作用。基于这些新的结构结果,提出了一种可能的自加工机制。该机制推测存在一个涉及一个羰基和两个羟基的六元过渡态,这与从不同物种的γ-GTs收集的所有现有实验数据以及我们新的丙氨酸扫描诱变数据一致。

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