Selli Mehmet Emrah, Landmann Jack H, Terekhova Marina, Lattin John, Heard Amanda, Hsu Yu-Sung, Chang Tien-Ching, Chang Jufang, Warrington John, Ha Helen, Kingston Natalie, Hogg Graham, Slade Michael, Berrien-Elliot Melissa M, Foster Mark, Kersting-Schadek Samantha, Gruszczynska Agata, DeNardo David, Fehniger Todd A, Artyomov Maxim, Singh Nathan
bioRxiv. 2023 Jan 27:2023.01.26.525725. doi: 10.1101/2023.01.26.525725.
Chimeric antigen receptor (CAR) engineered T cells often fail to enact effector functions after infusion into patients. Understanding the biological pathways that lead CAR T cells to failure is of critical importance in the design of more effective therapies. We developed and validated an model that drives T cell dysfunction through chronic CAR activation and interrogated how CAR costimulatory domains contribute to T cell failure. We found that dysfunctional CD28-based CARs targeting CD19 bear hallmarks of classical T cell exhaustion while dysfunctional 41BB-based CARs are phenotypically, transcriptionally and epigenetically distinct. We confirmed activation of this unique transcriptional program in CAR T cells that failed to control clinical disease. Further, we demonstrate that 41BB-dependent activation of the transcription factor FOXO3 is a significant contributor to this dysfunction and disruption of improves CAR T cell function. These findings identify that chronic activation of 41BB leads to novel state of T cell dysfunction that can be alleviated by genetic modification of FOXO3.
Chronic stimulation of CARs containing the 41BB costimulatory domain leads to a novel state of T cell dysfunction that is distinct from T cell exhaustion.
嵌合抗原受体(CAR)工程化T细胞在输注到患者体内后常常无法发挥效应功能。了解导致CAR T细胞功能衰竭的生物学途径对于设计更有效的治疗方法至关重要。我们开发并验证了一种通过慢性CAR激活导致T细胞功能障碍的模型,并研究了CAR共刺激域如何导致T细胞功能衰竭。我们发现,靶向CD19的基于CD28的功能失调的CAR具有经典T细胞耗竭的特征,而基于4-1BB的功能失调的CAR在表型、转录和表观遗传上是不同的。我们在未能控制临床疾病的CAR T细胞中证实了这种独特转录程序的激活。此外,我们证明转录因子FOXO3的4-1BB依赖性激活是这种功能障碍的重要原因,而对其进行破坏可改善CAR T细胞功能。这些发现表明,4-1BB的慢性激活会导致一种新的T细胞功能障碍状态,可通过对FOXO3进行基因改造来缓解。
对含有4-1BB共刺激域的CAR进行慢性刺激会导致一种新的T细胞功能障碍状态,这种状态不同于T细胞耗竭。