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与地中海僧海豹玩“捉迷藏”:公民科学数据集揭示了其基于分子痕迹(eDNA)的分布。

Playing "hide and seek" with the Mediterranean monk seal: a citizen science dataset reveals its distribution from molecular traces (eDNA).

机构信息

Department of Environmental and Earth Sciences, University of Milano-Bicocca, Piazza della Scienza 1, 20126, Milan, Italy.

MaRHE Center, Magoodhoo Island, Faafu Atoll, Republic of Maldives.

出版信息

Sci Rep. 2023 Feb 14;13(1):2610. doi: 10.1038/s41598-023-27835-6.

DOI:10.1038/s41598-023-27835-6
PMID:36788241
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9929094/
Abstract

Animal conservation relies on assessing the distribution and habitat use of species, but for endangered/elusive animals this can prove difficult. The Monk Seal, Monachus monachus, is one of the world's most endangered species of pinniped, and the only one endemic to the Mediterranean Sea. During recent decades, direct observations have been few and scattered, making it difficult to determine its distribution away from the Aegean Sea (core distribution area of the post-decline relict population). This study relies on environmental DNA (eDNA) analysis to detect the presence of the Monk Seal in 135 samples collected in 120 locations of the central/western Mediterranean Sea, spanning about 1500 km longitudinally and 1000 km latitudinally. A recently described species-specific qPCR assay was used on marine-water samples, mostly collected during 2021 by a Citizen Science (CS) project. Positive detections occurred throughout the longitudinal range, including the westernmost surveyed area (Balearic archipelago). The distribution of the positive detections indicated six "hotspots", mostly overlapping with historical Monk Seal sites, suggesting that habitat-specific characteristics play a fundamental role. We applied single-season occupancy models to correct for detection probability and to assess the importance of site-specific characteristics. The distance from small islets and protected (or access-restricted) areas was correlated negatively with the detection probability. This novel molecular approach, applied here for the first time in an extensive CS study, proved its potential as a tool for monitoring the distribution of this endangered/elusive species.

摘要

动物保护依赖于评估物种的分布和栖息地利用情况,但对于濒危/难以捉摸的动物来说,这可能证明是困难的。僧海豹(Monachus monachus)是世界上最濒危的鳍足类动物之一,也是唯一生活在地中海的物种。在最近几十年中,直接观察的机会很少且分散,因此难以确定其在爱琴海(衰退后残余种群的核心分布区域)以外的分布情况。本研究依赖于环境 DNA(eDNA)分析,以检测在 120 个地中海中部/西部地点采集的 135 个样本中僧海豹的存在情况,这些地点的跨度约为 1500 公里的经度和 1000 公里的纬度。最近描述的种特异性 qPCR 分析方法用于海洋水样,这些水样主要是在 2021 年由公民科学(CS)项目收集的。阳性检测结果发生在整个经度范围内,包括调查的最西部区域(巴利阿里群岛)。阳性检测结果的分布表明存在六个“热点”,这些热点与历史上的僧海豹栖息地大部分重叠,这表明特定栖息地的特征起着至关重要的作用。我们应用单季节占有率模型来纠正检测概率,并评估特定地点特征的重要性。与小岛和受保护(或限制进入)区域的距离与检测概率呈负相关。本研究首次在广泛的 CS 研究中应用了这种新颖的分子方法,证明了其作为监测这种濒危/难以捉摸物种分布的工具的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/768c5294c531/41598_2023_27835_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/899d8d8adb71/41598_2023_27835_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/297ccf389dbf/41598_2023_27835_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/74b906d03f4e/41598_2023_27835_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/c2461b4abecc/41598_2023_27835_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/768c5294c531/41598_2023_27835_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/899d8d8adb71/41598_2023_27835_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/297ccf389dbf/41598_2023_27835_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/74b906d03f4e/41598_2023_27835_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/c2461b4abecc/41598_2023_27835_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb28/9929094/768c5294c531/41598_2023_27835_Fig6_HTML.jpg

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