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马传染性子宫炎监测:实时 PCR 检测泰勒氏菌属的法国能力验证试验头 5 年结果。

Surveillance of Contagious Equine Metritis: Results of the First 5-Year Period of French Proficiency Tests for Taylorella equigenitalis Detection by Real-Time PCR.

机构信息

ANSES, Laboratory for Animal Health, Physiopathology and Epidemiology of Equine Diseases Unit, Goustranville, France.

ANSES, Laboratory for Animal Health, Physiopathology and Epidemiology of Equine Diseases Unit, Goustranville, France.

出版信息

J Equine Vet Sci. 2023 Jul;126:104248. doi: 10.1016/j.jevs.2023.104248. Epub 2023 Feb 14.

DOI:10.1016/j.jevs.2023.104248
PMID:36796741
Abstract

Contagious equine metritis (CEM) detection by PCR is recognized by the European Union according to Commission Implementing Regulation (EU) No 846/2014, and real-time PCR is now recommended by the World Organisation for Animal Health Terrestrial Manual at the same level as the culture method. The present study highlights the creation of an efficient network of approved laboratories in France in 2017 for CEM detection by real-time PCR. The network currently consists of 20 laboratories. A first proficiency test (PT) was organized by the national reference laboratory for CEM in 2017 to evaluate the performance of the early network, followed by annual proficiency tests organized for ongoing periodic assessment of network performance. Results of the 5 PTs organized from 2017 to 2021 are presented, during which 5 real-time PCRs and 3 DNA extraction methods were used. Overall, 99.20% of the qualitative data corresponded to expected results and the R-squared of global DNA amplification calculated for each PT varied from 0.728 to 0.899. DNA extraction is also an important step in the analytical process, and results were more favorable with direct lysis compared to column extraction. Focusing on the most commonly used PCR (PCR 1: 86.4% of results) showed lowest cycle threshold values with direct lysis compared to column and magnetic bead extractions, and with magnetic bead extraction compared to column extraction, but neither of these differences were statistically significant.

摘要

欧盟依据委员会实施法规(EU)No 846/2014 认可聚合酶链反应(PCR)检测马传染性子宫炎(CEM),世界动物卫生组织(OIE)在《陆生动物诊断试验和疫苗手册》中也将实时 PCR 法推荐为与培养法同等地位的方法。本研究重点介绍了法国在 2017 年为实时 PCR 检测 CEM 创建了一个高效的认可实验室网络。该网络目前由 20 个实验室组成。2017 年,国家 CEM 参考实验室组织了第一次能力验证(PT),以评估早期网络的性能,随后每年组织能力验证,以对网络性能进行定期评估。本文介绍了 2017 年至 2021 年组织的 5 次 PT 的结果,在此期间共使用了 5 种实时 PCR 和 3 种 DNA 提取方法。总的来说,99.20%的定性数据与预期结果相符,每次 PT 计算的总体 DNA 扩增的 R-squared 值在 0.728 到 0.899 之间。DNA 提取也是分析过程中的一个重要步骤,与柱提取相比,直接裂解的结果更有利。关注最常用的 PCR(PCR 1:占结果的 86.4%)表明,与柱提取和磁珠提取相比,直接裂解的循环阈值最低,与柱提取相比,磁珠提取的循环阈值也最低,但这些差异均无统计学意义。

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