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用于单细胞功能蛋白质组学的微流控技术的最新进展。

Recent advances in microfluidics for single-cell functional proteomics.

作者信息

Gebreyesus Sofani Tafesse, Muneer Gul, Huang Chih-Cheng, Siyal Asad Ali, Anand Mihir, Chen Yu-Ju, Tu Hsiung-Lin

机构信息

Institute of Chemistry, Academia Sinica, Taipei 11529, Taiwan.

Nano Science and Technology Program, Taiwan International Graduate Program, Academia Sinica, Taipei 11529, Taiwan.

出版信息

Lab Chip. 2023 Mar 28;23(7):1726-1751. doi: 10.1039/d2lc01096h.

Abstract

Single-cell proteomics (SCP) reveals phenotypic heterogeneity by profiling individual cells, their biological states and functional outcomes upon signaling activation that can hardly be probed other omics characterizations. This has become appealing to researchers as it enables an overall more holistic view of biological details underlying cellular processes, disease onset and progression, as well as facilitates unique biomarker identification from individual cells. Microfluidic-based strategies have become methods of choice for single-cell analysis because they allow facile assay integrations, such as cell sorting, manipulation, and content analysis. Notably, they have been serving as an enabling technology to improve the sensitivity, robustness, and reproducibility of recently developed SCP methods. Critical roles of microfluidics technologies are expected to further expand rapidly in advancing the next phase of SCP analysis to reveal more biological and clinical insights. In this review, we will capture the excitement of the recent achievements of microfluidics methods for both targeted and global SCP, including efforts to enhance the proteomic coverage, minimize sample loss, and increase multiplexity and throughput. Furthermore, we will discuss the advantages, challenges, applications, and future prospects of SCP.

摘要

单细胞蛋白质组学(SCP)通过对单个细胞、它们的生物学状态以及信号激活后的功能结果进行分析,揭示表型异质性,而这是其他组学表征难以探究的。这对研究人员颇具吸引力,因为它能够更全面地整体了解细胞过程、疾病发生和发展背后的生物学细节,还便于从单个细胞中鉴定独特的生物标志物。基于微流控的策略已成为单细胞分析的首选方法,因为它们允许轻松整合诸如细胞分选、操作和内容分析等检测。值得注意的是,它们一直作为一种使能技术,用于提高最近开发的SCP方法的灵敏度、稳健性和可重复性。预计微流控技术在推进SCP分析的下一阶段以揭示更多生物学和临床见解方面的关键作用将进一步迅速扩展。在本综述中,我们将捕捉微流控方法在靶向和全局SCP方面近期取得的成果所带来的兴奋之情,包括在提高蛋白质组覆盖范围、最小化样品损失以及增加多重性和通量方面所做的努力。此外,我们将讨论SCP的优势、挑战、应用和未来前景。

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