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越南非洲猪瘟群体内传播率的估计

Estimation of a Within-Herd Transmission Rate for African Swine Fever in Vietnam.

作者信息

Le Van Phan, Lan Nguyen Thi, Canevari Jose Tobias, Villanueva-Cabezas Juan Pablo, Padungtod Pawin, Trinh Thi Bich Ngoc, Nguyen Van Tam, Pfeiffer Caitlin N, Oberin Madalene V, Firestone Simon M, Stevenson Mark A

机构信息

Faculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi 10000, Vietnam.

Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville 3010, Australia.

出版信息

Animals (Basel). 2023 Feb 6;13(4):571. doi: 10.3390/ani13040571.

Abstract

We describe results from a panel study in which pigs from a 17-sow African swine fever (ASF) positive herd in Thái Bình province, Vietnam, were followed over time to record the date of onset of ASF signs and the date of death from ASF. Our objectives were to (1) fit a susceptible-exposed-infectious-removed disease model to the data with transmission coefficients estimated using approximate Bayesian computation; (2) provide commentary on how a model of this type might be used to provide decision support for disease control authorities. For the outbreak in this herd, the median of the average latent period was 10 days (95% HPD (highest posterior density interval): 2 to 19 days), and the median of the average duration of infectiousness was 3 days (95% HPD: 2 to 4 days). The estimated median for the transmission coefficient was 3.3 (95% HPD: 0.4 to 8.9) infectious contacts per ASF-infectious pig per day. The estimated median for the basic reproductive number, R, was 10 (95% HPD: 1.1 to 30). Our estimates of the basic reproductive number R were greater than estimates of R for ASF reported previously. The results presented in this study may be used to estimate the number of pigs expected to be showing clinical signs at a given number of days following an estimated incursion date. This will allow sample size calculations, with or without adjustment to account for less than perfect sensitivity of clinical examination, to be used to determine the appropriate number of pigs to examine to detect at least one with the disease. A second use of the results of this study would be to inform the equation-based within-herd spread components of stochastic agent-based and hybrid simulation models of ASF.

摘要

我们描述了一项群组研究的结果,该研究对越南太平省一个有17头母猪的非洲猪瘟(ASF)阳性猪群中的猪只进行了长期跟踪,记录了ASF症状出现的日期和因ASF死亡的日期。我们的目标是:(1)用近似贝叶斯计算法估计传播系数,将易感-暴露-感染-清除疾病模型应用于这些数据;(2)评论这种类型的模型如何用于为疾病控制当局提供决策支持。对于该猪群的疫情,平均潜伏期的中位数为10天(95%最高后验密度区间:2至19天),平均感染期的中位数为3天(95%最高后验密度区间:2至4天)。传播系数的估计中位数为每天每头ASF感染猪3.3次(95%最高后验密度区间:0.4至8.9次)感染接触。基本繁殖数R的估计中位数为10(95%最高后验密度区间:1.1至30)。我们对基本繁殖数R的估计高于先前报告的ASF的R估计值。本研究中呈现的结果可用于估计在估计的入侵日期后的给定天数内预计出现临床症状的猪只数量。这将使样本量计算(无论是否调整以考虑临床检查的灵敏度不完全理想)可用于确定检查的适当猪只数量,以检测至少一头患病猪。本研究结果的第二个用途是为基于方程的ASF随机个体模型和混合模拟模型中的群体内传播成分提供信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/018f/9951655/4732f9e9af03/animals-13-00571-g0A1.jpg

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