A.N. Nesmeyanov Institute of Organoelement Compounds, RAS, 28 ul. Vavilova, 119991 Moscow, Russia.
Division of Bioengineering, Graduate School, Izmir University of Economics, Izmir 35330, Turkey.
Int J Mol Sci. 2023 Feb 15;24(4):3874. doi: 10.3390/ijms24043874.
Tryptic proteolysis of protein micelles was studied using β-casein (β-CN) as an example. Hydrolysis of specific peptide bonds in β-CN leads to the degradation and rearrangement of the original micelles and the formation of new nanoparticles from their fragments. Samples of these nanoparticles dried on a mica surface were characterized by atomic force microscopy (AFM) when the proteolytic reaction had been stopped by tryptic inhibitor or by heating. The changes in the content of β-sheets, α-helices, and hydrolysis products during proteolysis were estimated by using Fourier-transform infrared (FTIR) spectroscopy. In the current study, a simple kinetic model with three successive stages is proposed to predict the rearrangement of nanoparticles and the formation of proteolysis products, as well as changes in the secondary structure during proteolysis at various enzyme concentrations. The model determines for which steps the rate constants are proportional to the enzyme concentration, and in which intermediate nano-components the protein secondary structure is retained and in which it is reduced. The model predictions were in agreement with the FTIR results for tryptic hydrolysis of β-CN at different concentrations of the enzyme.
采用β-酪蛋白(β-CN)作为实例研究了蛋白胶束的蛋白内切酶水解作用。β-CN 中特定肽键的水解导致原始胶束的降解和重排,并由其片段形成新的纳米颗粒。当通过胰蛋白酶抑制剂或加热停止蛋白内切酶反应时,将这些纳米颗粒的干燥样品在云母表面上用原子力显微镜(AFM)进行了表征。通过傅里叶变换红外(FTIR)光谱法评估了在蛋白内切酶作用过程中β-折叠、α-螺旋和水解产物的含量变化。在当前研究中,提出了一个具有三个连续阶段的简单动力学模型,以预测纳米颗粒的重排和蛋白内切酶作用过程中水解产物的形成,以及在不同酶浓度下蛋白二级结构的变化。该模型确定了哪些步骤的速率常数与酶浓度成正比,以及在哪个中间纳米组件中保留了蛋白二级结构,以及在哪个中间纳米组件中降低了蛋白二级结构。模型预测与在不同酶浓度下β-CN 的胰蛋白酶水解的 FTIR 结果一致。