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用于将乙醇醛进行碳守恒转化为乙酰辅酶A的合成代谢途径的实施。

implementation of a synthetic metabolic pathway for the carbon-conserving conversion of glycolaldehyde to acetyl-CoA.

作者信息

Wagner Nils, Bade Frederik, Straube Elly, Rabe Kenny, Frazão Cláudio J R, Walther Thomas

机构信息

TU Dresden, Institute of Natural Materials Technology, Dresden, Germany.

出版信息

Front Bioeng Biotechnol. 2023 Feb 9;11:1125544. doi: 10.3389/fbioe.2023.1125544. eCollection 2023.

Abstract

Ethylene glycol (EG) derived from plastic waste or CO can serve as a substrate for microbial production of value-added chemicals. Assimilation of EG proceeds though the characteristic intermediate glycolaldehyde (GA). However, natural metabolic pathways for GA assimilation have low carbon efficiency when producing the metabolic precursor acetyl-CoA. In alternative, the reaction sequence catalyzed by EG dehydrogenase, d-arabinose 5-phosphate aldolase, d-arabinose 5-phosphate isomerase, d-ribulose 5-phosphate 3-epimerase (Rpe), d-xylulose 5-phosphate phosphoketolase, and phosphate acetyltransferase may enable the conversion of EG into acetyl-CoA without carbon loss. We investigated the metabolic requirements for function of this pathway in by (over)expressing constituting enzymes in different combinations. Using C-tracer experiments, we first examined the conversion of EG to acetate the synthetic reaction sequence and showed that, in addition to heterologous phosphoketolase, overexpression of all native enzymes except Rpe was required for the pathway to function. Since acetyl-CoA could not be reliably quantified by our LC/MS-method, the distribution of isotopologues in mevalonate, a stable metabolite that is exclusively derived from this intermediate, was used to probe the contribution of the synthetic pathway to biosynthesis of acetyl-CoA. We detected strong incorporation of C carbon derived from labeled GA in all intermediates of the synthetic pathway. In presence of unlabeled co-substrate glycerol, 12.4% of the mevalonate (and therefore acetyl-CoA) was derived from GA. The contribution of the synthetic pathway to acetyl-CoA production was further increased to 16.1% by the additional expression of the native phosphate acyltransferase enzyme. Finally, we demonstrated that conversion of EG to mevalonate was feasible albeit at currently extremely small yields.

摘要

源自塑料垃圾或一氧化碳的乙二醇(EG)可作为微生物生产增值化学品的底物。EG的同化过程通过特征性中间体乙醇醛(GA)进行。然而,GA同化的天然代谢途径在产生代谢前体乙酰辅酶A时碳效率较低。作为替代方案,由EG脱氢酶、D-阿拉伯糖5-磷酸醛缩酶、D-阿拉伯糖5-磷酸异构酶、D-核糖ulose 5-磷酸3-表异构酶(Rpe)、D-木酮糖5-磷酸磷酸酮醇酶和磷酸乙酰转移酶催化的反应序列可使EG转化为乙酰辅酶A而无碳损失。我们通过以不同组合(过)表达组成酶来研究该途径在[具体微生物]中发挥功能的代谢需求。使用碳示踪实验,我们首先检查了EG通过合成反应序列转化为乙酸盐的情况,并表明,除了异源磷酸酮醇酶外,该途径发挥功能还需要过表达除Rpe之外的所有天然酶。由于我们的液相色谱/质谱方法无法可靠地定量乙酰辅酶A,因此使用甲羟戊酸(一种仅由此中间体衍生的稳定代谢物)中同位素异构体的分布来探究合成途径对乙酰辅酶A生物合成的贡献。我们在合成途径的所有中间体中检测到了源自标记GA的碳的强烈掺入。在存在未标记的共底物甘油的情况下,12.4%的甲羟戊酸(因此也是乙酰辅酶A)源自GA。通过额外表达天然磷酸酰基转移酶,合成途径对乙酰辅酶A产生的贡献进一步提高到了16.1%。最后,我们证明了EG转化为甲羟戊酸是可行的,尽管目前产率极低。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d990/9947464/da1210ace5cf/fbioe-11-1125544-g001.jpg

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