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韩国野生菌株中高变交配型的测定与分析。

Determination and Analysis of Hyper-Variable Mating Types in Wild Strains of in Korea.

作者信息

Park Mi-Jeong, Kim Eunjin, Jeong Yeun Sug, Son Mi-Young, Jang Yeongseon, Ka Kang-Hyeon

机构信息

Forest Microbiology Division, Department of Forest Bio-Resources, National Institute of Forest Science, Suwon, Korea.

出版信息

Mycobiology. 2023 Jan 11;51(1):26-35. doi: 10.1080/12298093.2022.2161157. eCollection 2023.

Abstract

The diversity of mating type in wild strains of was extensively analyzed to characterize and utilize them for developing new cultivars. One hundred twenty-three mating type alleles, including 67 newly discovered alleles, were identified from 106 wild strains collected for the past four decades in Korea. Based on previous studies and current findings, a total of 130  mating type alleles have been found, 124 of which were discovered from wild strains, indicating the hyper-variability of mating type alleles of . About half of the mating type alleles in wild strains were found in more than two strains, whereas the other half of the alleles were found in only one strain. About 90% of mating type combinations in dikaryotic wild strains showed a single occurrence. Geographically, diverse mating type alleles were intensively located in the central region of the Korean peninsula, whereas only allele was observed throughout Korea. We also found the conservation of the TCCCAC motif in addition to the previously reported motifs, including ATTGT, ACAAT, and GCGGAG, in the intergenic regions of mating loci. Sequence comparison among some alleles indicated that accumulated mutation and recombination would contribute to the diversification of mating type alleles in . Our data support the rapid evolution of mating locus in , and would help to understand the characteristics of mating loci of wild strains in Korea and help to utilize them for developing new cultivars.

摘要

对野生菌株交配型的多样性进行了广泛分析,以对其进行表征并将其用于培育新品种。从韩国过去40年收集的106株野生菌株中鉴定出123个交配型等位基因,其中包括67个新发现的等位基因。基于先前的研究和当前的发现,总共发现了130个交配型等位基因,其中124个是从野生菌株中发现的,这表明该菌株交配型等位基因具有高度变异性。野生菌株中约一半的交配型等位基因在两个以上的菌株中被发现,而另一半等位基因仅在一个菌株中被发现。在双核野生菌株中,约90%的交配型组合只出现一次。在地理上,不同的交配型等位基因集中分布在朝鲜半岛中部地区,而在韩国各地仅观察到等位基因。我们还发现在交配位点的基因间区域中,除了先前报道的包括ATTGT、ACAAT和GCGGAG在内的基序外,TCCCAC基序也具有保守性。一些等位基因之间的序列比较表明,积累的突变和重组有助于该菌株交配型等位基因的多样化。我们的数据支持该菌株交配位点的快速进化,并将有助于了解韩国野生菌株交配位点的特征,并有助于利用它们培育新品种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4e71/9946336/654b75b240c2/TMYB_A_2161157_F0001_C.jpg

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