State Key Laboratory of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi 830011, PR China.
China General Microbiological Culture Collection Center, State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
Int J Syst Evol Microbiol. 2023 Mar;73(3). doi: 10.1099/ijsem.0.005741.
Two Gram-stain-negative, strictly aerobic, rod-shaped, non-motile and non-gliding bacteria, designated as XJ19-10 and XJ19-11, were isolated from river water in Xinjiang Uygur Autonomous Region, PR China. Cells of these strains were catalase-, oxidase- and gelatinase-positive and contained carotenoids but no flexirubins. Growth occurred at 10-30 °C, pH 7.0-9.0 and with 0-2.5% (w/v) NaCl. On the basis of the results of 16S rRNA gene sequence and genome analyses, the two isolates represented members of the genus , and the closest relative was Z0201 with 16S rRNA gene sequence pairwise similarities of 97.9-98.1%. Furthermore, the average nucleotide identities and digital DNA-DNA hybridization identities between the two isolates and other relatives were all less than 82.9 and 28.2 %, respectively, all below the species delineation thresholds. The results of pan-genomic analysis indicated that the type strain XJ19-10 shared 2813 core gene clusters with other three type strains of members of the genus , as well as having 623 strain-specific clusters. The major polar lipids were phosphatidylethanolamine, phosphatidylcholine, an unidentified aminolipid and unidentified lipids. The predominant fatty acids (>10% of the total contents) were iso-C, iso-CG, iso-C 3-OH and summed feature 9, and MK-7 was the respiratory quinone. On the basis of the results of phenotypic, physiological, chemotaxonomic and genotypic characterization, strains XJ19-10 and XJ19-11 are considered to represent a novel species, for which the name sp. nov. is proposed. The type strain is XJ19-10 (=CGMCC 1.19385 =KCTC 92266).
两株革兰氏阴性、严格需氧、杆状、无动力、非滑行的细菌,分别命名为 XJ19-10 和 XJ19-11,从中国新疆维吾尔自治区的河水分离得到。这些菌株的细胞均为过氧化氢酶阳性、氧化酶阳性、明胶酶阳性,含有类胡萝卜素但不含弹性蛋白酶。它们在 10-30°C、pH 值 7.0-9.0 和 0-2.5%(w/v)NaCl 的条件下生长。基于 16S rRNA 基因序列和基因组分析的结果,这两个分离株代表了属的成员,与最接近的 Z0201 具有 16S rRNA 基因序列的相似性为 97.9-98.1%。此外,这两个分离株与其他亲缘株之间的平均核苷酸同一性和数字 DNA-DNA 杂交同一性均小于 82.9%和 28.2%,均低于种的划分阈值。泛基因组分析的结果表明,模式株 XJ19-10 与其他三个属的模式株共有 2813 个核心基因簇,同时还有 623 个菌株特异性簇。主要极性脂为磷脂酰乙醇胺、磷脂酰胆碱、一种未鉴定的氨基脂和未鉴定的脂类。主要脂肪酸(占总含量的>10%)为 iso-C、iso-CG、iso-C 3-OH 和总和特征 9,呼吸醌为 MK-7。基于表型、生理、化学分类和基因特征的结果,菌株 XJ19-10 和 XJ19-11 被认为代表了一个新的种,建议将其命名为 sp. nov.。模式株为 XJ19-10(=CGMCC 1.19385=KCTC 92266)。