Suppr超能文献

土耳其比加半岛地热环境中候选门“双茎菌门”的碳代谢与生物地理学

Carbon metabolism and biogeography of candidate phylum " Bipolaricaulota" in geothermal environments of Biga Peninsula, Turkey.

作者信息

Coskun Ömer K, Gomez-Saez Gonzalo V, Beren Murat, Ozcan Dogacan, Hosgormez Hakan, Einsiedl Florian, Orsi William D

机构信息

Department of Earth and Environmental Sciences, Paleontology and Geobiology, Ludwig-Maximilians-Universität München, Munich, Germany.

GeoBio-CenterLMU, Ludwig-Maximilians-Universität München, Munich, Germany.

出版信息

Front Microbiol. 2023 Feb 22;14:1063139. doi: 10.3389/fmicb.2023.1063139. eCollection 2023.

Abstract

Terrestrial hydrothermal springs and aquifers are excellent sites to study microbial biogeography because of their high physicochemical heterogeneity across relatively limited geographic regions. In this study, we performed 16S rRNA gene sequencing and metagenomic analyses of the microbial diversity of 11 different geothermal aquifers and springs across the tectonically active Biga Peninsula (Turkey). Across geothermal settings ranging in temperature from 43 to 79°C, one of the most highly represented groups in both 16S rRNA gene and metagenomic datasets was affiliated with the uncultivated phylum " Bipolaricaulota" (former " Acetothermia" and OP1 division). The highest relative abundance of " Bipolaricaulota" was observed in a 68°C geothermal brine sediment, where it dominated the microbial community, representing 91% of all detectable 16S rRNA genes. Correlation analysis of " Bipolaricaulota" operational taxonomic units (OTUs) with physicochemical parameters indicated that salinity was the strongest environmental factor measured associated with the distribution of this novel group in geothermal fluids. Correspondingly, analysis of 23 metagenome-assembled genomes (MAGs) revealed two distinct groups of " Bipolaricaulota" MAGs based on the differences in carbon metabolism: one group encoding the bacterial Wood-Ljungdahl pathway (WLP) for H dependent CO fixation is selected for at lower salinities, and a second heterotrophic clade that lacks the WLP that was selected for under hypersaline conditions in the geothermal brine sediment. In conclusion, our results highlight that the biogeography of " Bipolaricaulota" taxa is strongly correlated with salinity in hydrothermal ecosystems, which coincides with key differences in carbon acquisition strategies. The exceptionally high relative abundance of apparently heterotrophic representatives of this novel candidate Phylum in geothermal brine sediment observed here may help to guide future enrichment experiments to obtain representatives in pure culture.

摘要

陆地热液泉和含水层是研究微生物生物地理学的绝佳场所,因为在相对有限的地理区域内,它们具有高度的物理化学异质性。在本研究中,我们对土耳其构造活跃的比加半岛上11个不同的地热含水层和泉的微生物多样性进行了16S rRNA基因测序和宏基因组分析。在地热环境温度范围为43至79°C的情况下,16S rRNA基因和宏基因组数据集中最具代表性的群体之一与未培养的“双极茎菌门”(原“乙酸热菌门”和OP1分支)有关。在68°C的地热盐水沉积物中观察到“双极茎菌门”的相对丰度最高,它在微生物群落中占主导地位,占所有可检测到的16S rRNA基因的91%。对“双极茎菌门”的操作分类单元(OTU)与物理化学参数的相关性分析表明,盐度是所测量的与该新群体在地热流体中分布相关的最强环境因素。相应地,对23个宏基因组组装基因组(MAG)的分析显示,基于碳代谢的差异,“双极茎菌门”的MAG可分为两个不同的群体:一组编码用于依赖H的CO固定的细菌伍德-龙格达尔途径(WLP),在低盐度条件下被选择;另一组是缺乏WLP的异养进化枝,在高盐度条件下的地热盐水沉积物中被选择。总之,我们的结果突出表明,“双极茎菌门”类群的生物地理学与热液生态系统中的盐度密切相关,这与碳获取策略的关键差异相吻合。在此观察到的这种新型候选门的明显异养代表在地热盐水沉积物中的异常高相对丰度,可能有助于指导未来的富集实验以获得纯培养的代表菌株。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8368/9992828/3b6fcf82797b/fmicb-14-1063139-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验