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从加拿大安大略省一个用于娱乐的淡水锅湖分离出的炭疽芽孢杆菌N1的基因组序列草图

Draft Genome Sequence of Bacillus anthracis N1, Isolated from a Recreational Freshwater Kettle Lake in Ontario, Canada.

作者信息

Bryan Noah, Anderson Rebecca, Lawal Opeyemi U, Parreira Valeria R, Goodridge Lawrence

机构信息

Canadian Research Institute for Food Safety (CRIFS), University of Guelph, Guelph, Ontario, Canada.

Bayview Secondary School, Richmond Hill, Ontario, Canada.

出版信息

Microbiol Resour Announc. 2023 Apr 18;12(4):e0126222. doi: 10.1128/mra.01262-22. Epub 2023 Mar 13.

DOI:10.1128/mra.01262-22
PMID:36912633
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10112256/
Abstract

Bacillus anthracis is widespread in soil and a causative agent of anthrax, primarily in herbivores. Here, we report the draft genome sequence of Bacillus anthracis strain N1, which was isolated from a recreational freshwater lake and found to carry multiple antibiotic resistance genes and biosynthetic gene clusters.

摘要

炭疽芽孢杆菌广泛存在于土壤中,是炭疽病的病原体,主要感染食草动物。在此,我们报告了从一个休闲淡水湖中分离出的炭疽芽孢杆菌N1菌株的基因组草图序列,该菌株被发现携带多个抗生素抗性基因和生物合成基因簇。

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本文引用的文献

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Draft Genome Sequence of sp. Strain N5, Isolated from a Recreational Freshwater Kettle Lake in Ontario.从安大略省一个用于娱乐的淡水锅湖分离出的N5菌株的基因组序列草图。
Microbiol Resour Announc. 2023 Apr 18;12(4):e0126122. doi: 10.1128/mra.01261-22. Epub 2023 Mar 7.
2
antiSMASH 6.0: improving cluster detection and comparison capabilities.antiSMASH 6.0:提高簇检测和比较能力。
Nucleic Acids Res. 2021 Jul 2;49(W1):W29-W35. doi: 10.1093/nar/gkab335.
3
Convergent evolution of diverse Bacillus anthracis outbreak strains toward altered surface oligosaccharides that modulate anthrax pathogenesis.不同炭疽杆菌暴发菌株向改变表面寡糖的趋同进化,这些寡糖调节炭疽病的发病机制。
PLoS Biol. 2020 Dec 28;18(12):e3001052. doi: 10.1371/journal.pbio.3001052. eCollection 2020 Dec.
4
Improved metagenomic analysis with Kraken 2.Kraken 2 提升宏基因组分析。
Genome Biol. 2019 Nov 28;20(1):257. doi: 10.1186/s13059-019-1891-0.
5
CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database.CARD 2020:利用综合抗生素耐药数据库进行抗生素耐药组监测。
Nucleic Acids Res. 2020 Jan 8;48(D1):D517-D525. doi: 10.1093/nar/gkz935.
6
Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates.通过在分离株集合中使用抗生素耐药基因型-表型相关性来验证 AMRFinder 工具和耐药基因数据库。
Antimicrob Agents Chemother. 2019 Oct 22;63(11). doi: 10.1128/AAC.00483-19. Print 2019 Nov.
7
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