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采用多种光谱和分子对接方法研究桑色素与α2-巨球蛋白的结合:桑色素与αM 的相互作用。

Probing the binding of morin with alpha-2-macroglobulin using multi-spectroscopic and molecular docking approach : Interaction of morin with αM.

机构信息

Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, 202002, India.

Department of Biochemistry, Faculty of Dentistry, Jamia Millia Islamia, New Delhi, 110025, India.

出版信息

J Biol Phys. 2023 Jun;49(2):235-255. doi: 10.1007/s10867-023-09629-z. Epub 2023 Mar 13.

Abstract

Alpha-2-macroglobulin (αM) is an essential antiproteinase that is widely distributed in human plasma. The present study was aimed at investigating the binding of a potential therapeutic dietary flavonol, morin, with human αM using a multi-spectroscopic and molecular docking approach. Recently, flavonoid-protein interaction has gained significant attention, because a majority of dietary bioactive components interact with proteins, thereby altering their structure and function. The results of the activity assay exhibited a 48% reduction in the antiproteolytic potential of αM upon interaction with morin. Fluorescence quenching tests unequivocally confirmed quenching in the fluorescence of αM in the presence of morin, conforming complex formation and demonstrating that the binding mechanism involves a dynamic mode of interaction. Synchronous fluorescence spectra of αM with morin showed perturbation in the microenvironment around tryptophan residues. Furthermore, structural changes were observed through CD and FT-IR, showing alterations in the secondary structure of αM induced by morin. FRET further supports the results of the dynamic mode of quenching. Moderate interaction is shown by binding constant values using Stern-Volmer's fluorescence spectroscopy. Morin binds to αM at 298 K with a binding constant of 2.7 × 10 M, indicating the strength of the association. The αM-morin system was found to have negative ΔG values, which suggests that the binding process was spontaneous. Molecular docking also reveals the different amino acid residues involved in this binding process, revealing that the binding energy is -8.1 kcal/mol.

摘要

α2-巨球蛋白(αM)是一种广泛分布于人体血浆中的重要抗蛋白酶。本研究旨在采用多光谱和分子对接方法研究一种潜在的治疗性膳食类黄酮——桑色素与人αM 的结合。最近,类黄酮-蛋白质相互作用引起了人们的极大关注,因为大多数膳食生物活性成分与蛋白质相互作用,从而改变其结构和功能。活性测定结果表明,αM 与桑色素相互作用后,其抗蛋白水解活性降低了 48%。荧光猝灭试验明确证实了在桑色素存在的情况下αM 的荧光猝灭,证实了复合物的形成,并表明结合机制涉及动态相互作用模式。αM 与桑色素的同步荧光光谱显示色氨酸残基周围微环境发生了扰动。此外,通过 CD 和 FT-IR 观察到结构变化,表明桑色素诱导αM 的二级结构发生了变化。FRET 进一步支持了动态猝灭模式的结果。使用 Stern-Volmer 荧光光谱法得出的结合常数值表明存在中等相互作用。桑色素在 298 K 时与人αM 的结合常数为 2.7×10 M,表明了结合的强度。αM-桑色素体系的ΔG 值为负,这表明结合过程是自发的。分子对接还揭示了参与该结合过程的不同氨基酸残基,表明结合能为-8.1 kcal/mol。

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