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使用 F 和 C-编辑的 H NMR 光谱法直接测量细胞中的核苷核糖水解酶活性。

Direct Measurement of Nucleoside Ribohydrolase Enzyme Activities in Cells Using F and C-Edited H NMR Spectroscopy.

机构信息

Department of Chemistry, Adelphi University, 1 South Avenue, Garden City, New York 11530, United States.

出版信息

Anal Chem. 2023 Mar 28;95(12):5300-5306. doi: 10.1021/acs.analchem.2c05330. Epub 2023 Mar 14.

Abstract

Trichomoniasis is the most common nonviral sexually transmitted infection, affecting an estimated 275 million people worldwide. The causative agent is the parasitic protozoan . Although the disease itself is typically mild, individuals with trichomonal infections have a higher susceptibility to more serious conditions. The emergence of parasite strains resistant to current therapies necessitates the need for novel treatment strategies. Since is an obligate parasite that requires nucleoside salvage pathways, essential nucleoside ribohydrolase enzymes are promising new drug targets. Fragment screening and X-ray crystallography have enabled structure-guided design of inhibitors for two of these enyzmes. Linkage of enzymatic and antiprotozoal activity would be a transformative step toward designing novel, mechanism-based therapeutic agents. While a correlation with inhibition of purified enzyme would be mechanistically suggestive, a correlation with inhibition of in-cell enzyme activity would definitively establish this linkage. To demonstrate this linkage, we have translated our NMR-based activity assays that measure the activity of purified enzymes for use in cells. The F NMR-based activity assay for the pyrimidine-specific enzyme translated directly to in-cell assays. However, the H NMR-based activity assay for the purine-specific enzyme required a switch from adenosine to guanosine substrate and the use of C-editing to resolve the substrate H signals from cell and growth media background signals. The in-cell NMR assays are robust and have been demonstrated to provide inhibition data on test compounds. The results described here represent the first direct measurement of enzyme activity in protozoan parasite cells.

摘要

滴虫病是最常见的非病毒性性传播感染,估计全世界有 2.75 亿人受到感染。病原体是寄生的原生动物。尽管这种疾病本身通常很轻微,但感染滴虫的个体更容易感染更严重的疾病。由于寄生虫株对现有治疗方法产生抗药性,因此需要新的治疗策略。由于 是一种必需核苷补救途径的专性寄生虫,因此必需核苷核糖水解酶是有前途的新药物靶点。片段筛选和 X 射线晶体学已经能够针对其中两种酶进行基于结构的抑制剂设计。将酶和抗原生动物活性联系起来,将是设计新型基于机制的治疗剂的一个变革性步骤。虽然与纯化酶的抑制作用相关在机制上具有提示性,但与细胞内酶活性的抑制作用相关将明确建立这种联系。为了证明这种联系,我们已经将我们基于 NMR 的活性测定转化为用于 细胞的测定,该测定用于测量纯化酶的活性。基于 F NMR 的嘧啶特异性酶的活性测定可直接转化为细胞内测定。然而,基于 H NMR 的嘌呤特异性酶的活性测定需要从腺苷切换到鸟苷底物,并使用 C 编辑来分辨来自细胞和生长培养基背景信号的底物 H 信号。细胞内 NMR 测定具有稳健性,并已证明可提供测试化合物的抑制数据。这里描述的结果代表了在原生动物寄生虫细胞中首次直接测量酶活性。

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