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一种核苷水解酶,可在营养缺陷型寄生虫阴道毛滴虫中回收碱基和烟酰胺。

A riboside hydrolase that salvages both nucleobases and nicotinamide in the auxotrophic parasite Trichomonas vaginalis.

机构信息

Biocrystallography Unit, Division of Immunology, Transplantation and Infectious Diseases, IRCCS San Raffaele Scientific Institute, Milano, Italy; Faculty of Medicine and Surgery, Università Vita-Salute San Raffaele, Milano, Italy.

Department of Chemistry, Adelphi University, Garden City, New York, USA.

出版信息

J Biol Chem. 2023 Sep;299(9):105077. doi: 10.1016/j.jbc.2023.105077. Epub 2023 Jul 21.

Abstract

Pathogenic parasites of the Trichomonas genus are causative agents of sexually transmitted diseases affecting millions of individuals worldwide and whose outcome may include stillbirths and enhanced cancer risks and susceptibility to HIV infection. Trichomonas vaginalis relies on imported purine and pyrimidine nucleosides and nucleobases for survival, since it lacks the enzymatic activities necessary for de novo biosynthesis. Here we show that T. vaginalis additionally lacks homologues of the bacterial or mammalian enzymes required for the synthesis of the nicotinamide ring, a crucial component in the redox cofactors NAD and NADP. Moreover, we show that a yet fully uncharacterized T. vaginalis protein homologous to bacterial and protozoan nucleoside hydrolases is active as a pyrimidine nucleosidase but shows the highest specificity toward the NAD metabolite nicotinamide riboside. Crystal structures of the trichomonal riboside hydrolase in different states reveals novel intermediates along the nucleoside hydrolase-catalyzed hydrolytic reaction, including an unexpected asymmetry in the homotetrameric assembly. The active site structure explains the broad specificity toward different ribosides and offers precise insights for the engineering of specific inhibitors that may simultaneously target different essential pathways in the parasite.

摘要

阴道毛滴虫属的致病寄生虫是导致全球数百万人感染的性传播疾病的病原体,其后果可能包括死产、癌症风险增加以及易感染艾滋病毒。阴道毛滴虫依赖于进口的嘌呤和嘧啶核苷和碱基存活,因为它缺乏从头合成所需的酶活性。在这里,我们表明,阴道毛滴虫还缺乏细菌或哺乳动物酶的同源物,这些酶是合成烟酰胺环所必需的,烟酰胺环是氧化还原辅因子 NAD 和 NADP 的关键组成部分。此外,我们还表明,一种尚未完全表征的阴道毛滴虫蛋白与细菌和原生动物核苷水解酶同源,具有嘧啶核苷酶的活性,但对 NAD 代谢物烟酰胺核苷具有最高的特异性。不同状态下的毛滴虫核苷水解酶的晶体结构揭示了核苷水解酶催化水解反应中的新中间体,包括同四聚体组装中的意外不对称性。活性位点结构解释了对不同核糖的广泛特异性,并为工程特定抑制剂提供了精确的见解,这些抑制剂可能同时靶向寄生虫中不同的必需途径。

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