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基因表达和身体结构发育的稳定性导致了进化保守性。

Stability in gene expression and body-plan development leads to evolutionary conservation.

作者信息

Uchida Yui, Takeda Hiroyuki, Furusawa Chikara, Irie Naoki

机构信息

Center for Biosystems Dynamics Research, RIKEN, 6-2-3 Furuedai, Suita, Osaka, 565-0874, Japan.

Department of Biological Sciences, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-Ku, Tokyo, 113-0033, Japan.

出版信息

Evodevo. 2023 Mar 14;14(1):4. doi: 10.1186/s13227-023-00208-w.

Abstract

BACKGROUND

Phenotypic evolution is mainly explained by selection for phenotypic variation arising from factors including mutation and environmental noise. Recent theoretical and experimental studies have suggested that phenotypes with greater developmental stability tend to have a constant phenotype and gene expression level within a particular genetic and environmental condition, and this positively correlates with stronger evolutionary conservation, even after the accumulation of genetic changes. This could reflect a novel mechanism that contributes to evolutionary conservation; however, it remains unclear whether developmental stability is the cause, or whether at least it contributes to their evolutionary conservation. Here, using Japanese medaka lines, we tested experimentally whether developmental stages and gene expression levels with greater stability led to their evolutionary conservation.

RESULTS

We first measured the stability of each gene expression level and developmental stage (defined here as the whole embryonic transcriptome) in the inbred F0 medaka population. We then measured their evolutionary conservation in the F3 generation by crossing the F0 line with the distantly related Japanese medaka line (Teradomori), followed by two rounds of intra-generational crossings. The results indicated that the genes and developmental stages that had smaller variations in the F0 generation showed lower diversity in the hybrid F3 generation, which implies a causal relationship between stability and evolutionary conservation.

CONCLUSIONS

These findings suggest that the stability in phenotypes, including the developmental stages and gene expression levels, leads to their evolutionary conservation; this most likely occurs due to their low potential to generate phenotypic variation. In addition, since the highly stable developmental stages match with the body-plan-establishment stage, it also implies that the developmental stability potentially contributed to the strict conservation of animal body plan.

摘要

背景

表型进化主要是通过对由包括突变和环境噪声等因素引起的表型变异进行选择来解释的。最近的理论和实验研究表明,具有更高发育稳定性的表型在特定的遗传和环境条件下往往具有恒定的表型和基因表达水平,并且即使在遗传变化积累之后,这也与更强的进化保守性呈正相关。这可能反映了一种有助于进化保守的新机制;然而,尚不清楚发育稳定性是原因,还是至少它有助于它们的进化保守性。在这里,我们使用日本青鳉品系,通过实验测试了具有更高稳定性的发育阶段和基因表达水平是否导致了它们的进化保守性。

结果

我们首先测量了近交F0代日本青鳉群体中每个基因表达水平和发育阶段(这里定义为整个胚胎转录组)的稳定性。然后,我们通过将F0品系与远缘相关的日本青鳉品系(寺森)杂交,随后进行两轮代内杂交,测量了它们在F3代中的进化保守性。结果表明,在F0代中变异较小的基因和发育阶段在杂交F3代中表现出较低的多样性,这意味着稳定性和进化保守性之间存在因果关系。

结论

这些发现表明,包括发育阶段和基因表达水平在内的表型稳定性导致了它们的进化保守性;这很可能是由于它们产生表型变异的潜力较低。此外,由于高度稳定的发育阶段与身体蓝图建立阶段相匹配,这也意味着发育稳定性可能有助于动物身体蓝图的严格保守。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2248/10015717/6f76e3f7f2c4/13227_2023_208_Fig1_HTML.jpg

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