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鉴定四连接蛋白-纤溶酶原相互作用的新型抑制剂以抑制乳腺癌侵袭:基于计算和细胞的综合研究。

Identification of novel inhibitors of tetranectin-plasminogen interaction to suppress breast cancer invasion: an integrated computational and cell-based investigation.

机构信息

Immunobiology Lab, Department of Biotechnology, University of Kashmir, Srinagar, J&K, India.

Department of Biochemistry, Deshbandhu College, University of Delhi, Delhi, India.

出版信息

J Biomol Struct Dyn. 2023;41(24):15023-15032. doi: 10.1080/07391102.2023.2187228. Epub 2023 Mar 16.

Abstract

Tetranectin-plasminogen interaction plays a defining role in extracellular matrix degradation, enabling tumor cell invasion and metastasis. This interaction occurs via the carbohydrate recognition domain (CRD) and Kringle 4 domain of tetranectin and plasminogen, respectively, leading to activation of the plasminogen-cascade that triggers the proteolytic processes. Thus targeting this interaction represents an important strategy to suppress tumor cell migration and invasion. In this direction, we attempted to target the CRD of tetranectin to inhibit its interaction with the Kringle-4 domain of plasminogen using natural bioactive compounds. A cheminformatics pipeline for drug designing and screening was utilized to obtain lead compound(s) that exhibit conformationally and energetically viable CRD binding. Out of 206 compounds screened, diosgenin and scytonemin displayed the most favorable interactions with CRD. Short-term molecular dynamics simulations of 20 ns were employed to further study the conformational stability of both compounds with tetranectin CRD which reflected at the increased stability of diosgenin in the CRD binding pocket compared to scytonemin. Finally, an extended molecular dynamic simulation of 100 ns affirmed the robust and stable interaction of diosgenin with CRD. Furthermore, diosgenin was observed to exert a pronounced anti-proliferative effect on high tetranectin-expressing MDA-MB-231 breast cancer cells. The inhibitory effect of diosgenin on the tetranectin-plasminogen interaction was corroborated by the reduced migration and invasiveness of MDA-MB-231 cells under diosgenin treatment. Overall the study presents an alternate and safer approach to impede breast cancer metastasis and delineates the novel anti-metastatic activity of diosgenin.Communicated by Ramaswamy H. Sarma.

摘要

四连接蛋白-纤溶酶原相互作用在细胞外基质降解中起着决定性作用,使肿瘤细胞侵袭和转移。这种相互作用分别通过四连接蛋白的碳水化合物识别结构域(CRD)和纤溶酶原的 Kringle 4 结构域发生,导致纤溶酶原级联的激活,触发蛋白水解过程。因此,靶向这种相互作用代表了抑制肿瘤细胞迁移和侵袭的重要策略。在这一方向上,我们试图使用天然生物活性化合物靶向四连接蛋白的 CRD,以抑制其与纤溶酶原的 Kringle-4 结构域相互作用。利用药物设计和筛选的化学信息学管道,获得了具有构象和能量可行的 CRD 结合的先导化合物。在筛选的 206 种化合物中,薯蓣皂苷元和 Scytonemin 与 CRD 显示出最有利的相互作用。进行了 20 ns 的短期分子动力学模拟,以进一步研究这两种化合物与四连接蛋白 CRD 的构象稳定性,这反映了薯蓣皂苷元在 CRD 结合口袋中的稳定性增加,而 Scytonemin 则相反。最后,100 ns 的扩展分子动力学模拟证实了薯蓣皂苷元与 CRD 的稳定且牢固的相互作用。此外,观察到薯蓣皂苷元对高表达四连接蛋白的 MDA-MB-231 乳腺癌细胞表现出明显的抗增殖作用。薯蓣皂苷元对四连接蛋白-纤溶酶原相互作用的抑制作用通过 MDA-MB-231 细胞在薯蓣皂苷元处理下迁移和侵袭能力的降低得到证实。总体而言,该研究提出了一种替代且更安全的方法来阻止乳腺癌转移,并阐明了薯蓣皂苷元的新型抗转移活性。由 Ramaswamy H. Sarma 交流。

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