Center for Radiological Research, Columbia University Vagelos College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, New York, USA.
Cytogenet Genome Res. 2023;163(3-4):197-209. doi: 10.1159/000530172. Epub 2023 Mar 16.
Blood-based gene expression profiles that can reconstruct radiation exposure are being developed as a practical approach to radiation biodosimetry. However, age and sex could potentially limit the accuracy of the approach. In this study, we determined the impact of age on the peripheral blood cell gene expression profile of female mice exposed to radiation and identified differences and similarities with a previously obtained transcriptomic signature of male mice. Young (2 months) and old (24 months) female mice were irradiated with 4 Gy X-rays, total RNA was isolated from blood 24 hours later and subjected to whole-genome microarray analysis. Dose reconstruction analyses using a gene signature trained on gene expression data from irradiated young male mice showed accurate reconstruction of 0 or 4 Gy doses with root mean square error of ±0.75 Gy (R2 = 0.90) in young female mice. Although dose reconstruction for irradiated old female mice was less accurate than young female mice, the deviation from the actual radiation dose was not statistically significant. Pathway analysis of differentially expressed genes revealed that after irradiation, apoptosis-related functions were overrepresented, whereas functions related to quantities of various immune cell subtypes were underrepresented, among differentially expressed genes from young female mice, but not older animals. Furthermore, young mice significantly upregulated genes involved in phagocytosis, a process that eliminates apoptotic cells and preserves tissue homeostasis. Both functions were also overrepresented in young, but not old, male mice following 4 Gy X-irradiation. Lastly, functions associated with neutrophil activation that is essential for killing invading pathogens and regulating the inflammatory response were predicted to be uniquely enriched in young but not old female mice. This work supports the concept that peripheral blood gene expression profiles can be identified in mice that accurately predict physical radiation dose exposure irrespective of age and sex.
正在开发能够重建辐射暴露的基于血液的基因表达谱,作为辐射生物剂量测定的一种实用方法。然而,年龄和性别可能会限制该方法的准确性。在这项研究中,我们确定了年龄对暴露于辐射的雌性小鼠外周血细胞基因表达谱的影响,并与先前获得的雄性小鼠转录组特征进行了比较和分析。年轻(2 个月)和年老(24 个月)的雌性小鼠接受 4 Gy X 射线照射,24 小时后从血液中分离总 RNA,并进行全基因组微阵列分析。使用在接受年轻雄性小鼠照射的基因表达数据上训练的基因特征进行剂量重建分析,在年轻雌性小鼠中,0 或 4 Gy 剂量的重建准确,均方根误差为±0.75 Gy(R2=0.90)。尽管对年老雌性小鼠照射的剂量重建准确性不如年轻雌性小鼠,但与实际辐射剂量的偏差没有统计学意义。差异表达基因的通路分析表明,在受到照射后,凋亡相关功能被过度表达,而与各种免疫细胞亚型数量相关的功能被低表达,这在年轻雌性小鼠的差异表达基因中,但在年老动物中没有。此外,年轻小鼠显著上调了参与吞噬作用的基因,这是一种消除凋亡细胞并维持组织内稳态的过程。年轻雄性小鼠接受 4 Gy X 射线照射后,这两种功能也被过度表达。最后,与中性粒细胞激活相关的功能被预测在年轻雌性小鼠中富集,但在年老雌性小鼠中没有。这项工作支持了这样一种概念,即在小鼠中可以识别出能够准确预测物理辐射剂量暴露的外周血基因表达谱,而不受年龄和性别的影响。