Liu Tuoyu, Yang Shan, Luo Boyu, Fan Xinyue, Zhuang Yingtan, Gao George F, Bi Yuhai, Teng Yue
State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Center for Influenza Research and Early-warning (CASCIRE), CAS-TWAS Center of Excellence for Emerging Infectious Diseases (CEEID), Chinese Academy of Sciences, Beijing, China.
J Med Virol. 2023 Mar;95(3):e28683. doi: 10.1002/jmv.28683.
An ongoing outbreak of monkeypox virus (MPXV) was first reported in the United Kingdom on 6 May 2022. As of 17 November, there had been a total of 80 221 confirmed MPXV cases in over 110 countries. Based on data reported between 6 May and 30 June 2022 in the United Kingdom, Spain, and Germany, we applied a deep learning approach using convolutional neural networks to evaluate the parameters of the 2022 MPXV outbreak. The basic reproduction number (R ) of MPXV was estimated to be 2.32 in the United Kingdom, which indicates the active diffusion of MPXV since the beginning of the outbreak. The data from Spain and Germany produced higher median R values of 2.42 and 2.88, respectively. Importantly, the estimated R of MPXV in the three countries tends to the previously calculated R of smallpox (3.50 to 6.00). Furthermore, the incubation (1/ε) and infectious (1/γ) period was predicted between 9 and 10 days and 4-5 days, respectively. The R value derived from MPXV is consistent with the significantly increasing number of cases, indicating the risk of a rapid spread of MPXV worldwide, which would provide important insights for the prevention and control of MPXV epidemic.
2022年5月6日,英国首次报告了猴痘病毒(MPXV)的持续疫情。截至11月17日,110多个国家共报告了80221例确诊的猴痘病例。基于2022年5月6日至6月30日在英国、西班牙和德国报告的数据,我们应用了一种使用卷积神经网络的深度学习方法来评估2022年猴痘疫情的参数。在英国,猴痘病毒的基本再生数(R)估计为2.32,这表明自疫情开始以来猴痘病毒在积极传播。西班牙和德国的数据分别得出了更高的R中位数,分别为2.42和2.88。重要的是,这三个国家猴痘病毒的估计R值趋向于先前计算的天花的R值(3.50至6.00)。此外,预测潜伏期(1/ε)和传染期(1/γ)分别在9至10天和4至5天之间。从猴痘病毒得出的R值与病例数的显著增加一致,这表明猴痘病毒在全球范围内快速传播的风险,这将为猴痘疫情的预防和控制提供重要见解。