Department of Cardiology, Tianjin Beichen Traditional Chinese Medicine Hospital, No.436 Jingjin Road, Beichen District, Tianjin, 300400, P. R. China.
Department of Nephrology, Tianjin Beichen Traditional Chinese Medicine Hospital, Beichen District, Tianjin, 300400, P. R. China.
BMC Cardiovasc Disord. 2023 Mar 18;23(1):141. doi: 10.1186/s12872-023-03158-2.
Atherosclerosis (AS) is a chronic inflammatory disease, as a main cause leading to vascular diseases worldwide. Although increasing studies have focused on macrophages in AS, the exact relating mechanism is still largely unclear. Our study aimed to explore the pathogenic role and diagnostic role of macrophage autophagy related genes (MARGs) in AS.
All datasets were downloaded from Gene Expression Omnibus database and Human Autophagy Database. The differential expression analysis and cross analysis were performed to identify candidate MARGs. GO and KEGG enrichment analyses were conducted to obtain the functional information. Moreover, we analyzed the correlation between target gene and macrophage polarization in AS. The correlation between target gene and plaque instability, different stages of AS were also analyzed.
Compared with normal samples, a total of 575 differentially expressed genes (DEGs) were identified in AS samples. A total of 12 overlapped genes were obtained after cross-analysis of the above 575 DEGs and autophagy related genes (ARGs). Then, 10 MARGs were identified in AS samples, which were significantly enriched in 22 KEGG pathways and 61 GO terms. The expression of HSPB8 was significantly down-regulated in atherosclerotic samples compared with normal samples (with largest fold change). Meanwhile, the proportion of M-CSF in low HSPB8 expression AS group was higher than high expression AS group. Furthermore, the expression of HSPB8 was negatively correlated with most inflammatory factors.
The downregulation of MARG HSPB8 probably involves in the M2 macrophage polarization in AS samples. HSPB8 is a promising diagnostic marker for AS patients.
动脉粥样硬化(AS)是一种慢性炎症性疾病,是全球血管疾病的主要病因。尽管越来越多的研究集中在 AS 中的巨噬细胞上,但确切的相关机制仍在很大程度上不清楚。本研究旨在探讨巨噬细胞自噬相关基因(MARGs)在 AS 中的致病作用和诊断作用。
从基因表达综合数据库和人类自噬数据库中下载所有数据集。通过差异表达分析和交叉分析来鉴定候选 MARGs。进行 GO 和 KEGG 富集分析以获得功能信息。此外,我们分析了目标基因与 AS 中巨噬细胞极化的相关性。还分析了目标基因与斑块不稳定性和 AS 不同阶段的相关性。
与正常样本相比,AS 样本中总共鉴定出 575 个差异表达基因(DEGs)。对上述 575 个 DEGs 和自噬相关基因(ARGs)进行交叉分析后,共获得 12 个重叠基因。然后,在 AS 样本中鉴定出 10 个 MARGs,它们显著富集在 22 个 KEGG 通路和 61 个 GO 术语中。与正常样本相比,HSPB8 在动脉粥样硬化样本中的表达显著下调(具有最大的倍数变化)。同时,低 HSPB8 表达 AS 组中的 M-CSF 比例高于高表达 AS 组。此外,HSPB8 的表达与大多数炎症因子呈负相关。
MARGHSPB8 的下调可能涉及 AS 样本中 M2 巨噬细胞的极化。HSPB8 是 AS 患者有前途的诊断标志物。