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鉴定与乳糖化相关的模型,以预测胃癌的预后、肿瘤浸润免疫细胞和免疫治疗反应。

Identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer.

机构信息

Department of General Surgery, The Second Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China.

出版信息

Front Immunol. 2023 Mar 3;14:1149989. doi: 10.3389/fimmu.2023.1149989. eCollection 2023.

Abstract

BACKGROUND

The epigenetic regulatory chemical lactate is a product of glycolysis. It can regulate gene expression through histone lactylation, thereby promoting tumor proliferation, metastasis, and immunosuppression.

METHODS

In this study, a lactylation-related model for gastric cancer (GC) was constructed, and its relationships to prognosis, immune cell infiltration, and immunotherapy were investigated. By contrasting normal tissues and tumor tissues, four lactylation-related pathways that were substantially expressed in GC tissues were found in the GSEA database. Six lactylation-related genes were screened for bioinformatic analysis. The GC data sets from the TCGA and GEO databases were downloaded and integrated to perform cluster analysis, and the lactylation related model was constructed by secondary clustering.

RESULTS

The fingding demonstrated that the lactylation score has a strong correlation with the overall survival rate from GC and the progression of GC. Mechanistic experiments showed that abundant immune cell infiltration (macrophages showed the highest degree of infiltration) and increased genetic instability are traits of high lactylation scores. Immune checkpoint inhibitors (ICIs) demonstrated a reduced response rate in GC with high lactylation scores. At the same time, tumors with high lactylation scores had high Tumor Immune Dysfunction and Exclusion scores, which means that they had a higher risk of immune evasion and dysfunction.

DISCUSSION

These findings indicate that the lactylation score can be used to predict the malignant progression and immune evasion of GC. This model also can guide the treatment response to ICIs of GC. The constructed model of the lactate gene is also expected to become a potential therapeutic target for GC and diagnostic marker.

摘要

背景

组蛋白乳酸化是糖酵解的产物,作为一种表观遗传调控化学物质,它可以通过组蛋白乳酸化来调节基因表达,从而促进肿瘤的增殖、转移和免疫抑制。

方法

本研究构建了一个胃癌(GC)的乳酸化相关模型,并探讨了其与预后、免疫细胞浸润和免疫治疗的关系。通过对比正常组织和肿瘤组织,在 GSEA 数据库中发现了四个在 GC 组织中显著表达的乳酸化相关通路。通过生物信息学分析筛选了六个乳酸化相关基因。从 TCGA 和 GEO 数据库下载 GC 数据集并进行整合,进行聚类分析,并通过二次聚类构建乳酸化相关模型。

结果

研究发现,乳酸化评分与 GC 的总生存率和 GC 的进展具有很强的相关性。机制实验表明,丰富的免疫细胞浸润(巨噬细胞浸润程度最高)和遗传不稳定性增加是高乳酸化评分的特征。免疫检查点抑制剂(ICIs)在乳酸化评分高的 GC 中的反应率降低。同时,乳酸化评分高的肿瘤具有较高的肿瘤免疫功能障碍和排除评分,这意味着它们具有更高的免疫逃逸和功能障碍风险。

讨论

这些发现表明,乳酸化评分可用于预测 GC 的恶性进展和免疫逃逸。该模型还可以指导 GC 对 ICIs 的治疗反应。构建的乳酸基因模型也有望成为 GC 的潜在治疗靶点和诊断标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/14ba/10020516/0468ab6f3778/fimmu-14-1149989-g001.jpg

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