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在扩大区域中依赖MukBEF的染色体组织

MukBEF-dependent chromosomal organization in widened .

作者信息

Japaridze Aleksandre, van Wee Raman, Gogou Christos, Kerssemakers Jacob W J, van den Berg Daan F, Dekker Cees

机构信息

Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, Netherlands.

出版信息

Front Microbiol. 2023 Mar 3;14:1107093. doi: 10.3389/fmicb.2023.1107093. eCollection 2023.

Abstract

The bacterial chromosome is spatially organized through protein-mediated compaction, supercoiling, and cell-boundary confinement. Structural Maintenance of Chromosomes (SMC) complexes are a major class of chromosome-organizing proteins present throughout all domains of life. Here, we study the role of the SMC complex MukBEF in chromosome architecture and segregation. Using quantitative live-cell imaging of shape-manipulated cells, we show that MukBEF is crucial to preserve the toroidal topology of the chromosome and that it is non-uniformly distributed along the chromosome: it prefers locations toward the origin and away from the terminus of replication, and it is unevenly distributed over the origin of replication along the two chromosome arms. Using an ATP hydrolysis-deficient MukB mutant, we confirm that MukBEF translocation along the chromosome is ATP-dependent, in contrast to its loading onto DNA. MukBEF and MatP are furthermore found to be essential for sister chromosome decatenation. We propose a model that explains how MukBEF, MatP, and their interacting partners organize the chromosome and contribute to sister segregation. The combination of bacterial cell-shape modification and quantitative fluorescence microscopy paves way to investigating chromosome-organization factors .

摘要

细菌染色体通过蛋白质介导的压缩、超螺旋化和细胞边界限制进行空间组织。染色体结构维持(SMC)复合物是一类主要的染色体组织蛋白,存在于生命的所有领域。在这里,我们研究SMC复合物MukBEF在染色体结构和分离中的作用。通过对形状操纵细胞的定量活细胞成像,我们表明MukBEF对于维持染色体的环形拓扑结构至关重要,并且它沿着染色体非均匀分布:它倾向于靠近复制起点和远离复制终点的位置,并且沿着两条染色体臂在复制起点上分布不均。使用ATP水解缺陷型MukB突变体,我们证实MukBEF沿着染色体的易位是ATP依赖性的,这与其加载到DNA上的情况相反。此外,发现MukBEF和MatP对于姐妹染色体解连环至关重要。我们提出了一个模型,解释了MukBEF、MatP及其相互作用伙伴如何组织染色体并促进姐妹分离。细菌细胞形状修饰和定量荧光显微镜的结合为研究染色体组织因子铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e503/10020239/e9f6f9d6dc62/fmicb-14-1107093-g001.jpg

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