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PCAT6 的泛癌症分析及其对食管鳞癌细胞增殖和迁移的影响。

Pan-cancer analysis of PCAT6 and its effect on oesophageal squamous cell carcinoma cell proliferation and migration.

机构信息

Department of Pathology, Wannan Medical College, Wuhu, Anhui, China.

Department of Health Inspection and Quarantine, Wannan Medical College, Wuhu, Anhui, China.

出版信息

Med Oncol. 2023 Mar 22;40(4):125. doi: 10.1007/s12032-023-01982-2.

Abstract

Bioinformatics methods were used to analyze the role of PCAT6 in a variety of tumors and verify its role in oesophageal squamous cell carcinoma (ESCC) EC109 cells. The pan-cancer dataset was downloaded from the University of California Santa Cruz (UCSC) database to analyze the expression of PCAT6 in pan-cancer and its relationship with prognosis, clinical features, and immune infiltration. The expression and prognosis of PCAT6 in ESCC were verified by Gene Expression Omnibus (GEO) and Kaplan-Meier database. CCK8, colony formation, wound healing, Transwell cell invasion (CI), and cell migration (CM) assays were used to detect the effect of PCAT6 knockdown on the ability of ESCC cell proliferation (CP), CI and CM. Gene Set Enrichment Analysis was used to analyze the signaling pathways involved in the regulation of PCAT6. Quantitative real-time PCR and western blotting were used to examine the expression of cancer stem cell-related markers and the activation of JAK/STAT pathway in ESCC after PCAT6 knockdown. PCAT6 is significantly up-regulated in a variety of tumor tissues, and its expression is closely related to prognosis, clinical features and immune infiltration. High expression of PCAT6 leads to poor prognosis in ESCC patients. In ESCC EC109 cells, PCAT6 knockdown inhibited the ability of CP, CI, CM, and stemness, and inhibited the activation of JAK/STAT signaling pathway. PCAT6 expression is elevated in a variety of tumors. PCAT6 plays an oncogene role in ESCC by activating the JAK/STAT signaling pathway.

摘要

生物信息学方法用于分析 PCAT6 在多种肿瘤中的作用,并验证其在食管鳞状细胞癌(ESCC)EC109 细胞中的作用。从加利福尼亚大学圣克鲁兹分校(UCSC)数据库下载泛癌数据集,分析 PCAT6 在泛癌中的表达及其与预后、临床特征和免疫浸润的关系。通过基因表达综合数据库(GEO)和 Kaplan-Meier 数据库验证 ESCC 中 PCAT6 的表达和预后。CCK8、集落形成、划痕愈合、Transwell 细胞侵袭(CI)和细胞迁移(CM)测定用于检测 PCAT6 敲低对 ESCC 细胞增殖(CP)、CI 和 CM 能力的影响。基因集富集分析用于分析参与 PCAT6 调控的信号通路。定量实时 PCR 和 Western blot 用于检测 ESCC 中 PCAT6 敲低后癌症干细胞相关标志物的表达和 JAK/STAT 通路的激活。PCAT6 在多种肿瘤组织中显著上调,其表达与预后、临床特征和免疫浸润密切相关。PCAT6 高表达导致 ESCC 患者预后不良。在 ESCC EC109 细胞中,PCAT6 敲低抑制 CP、CI、CM 和干性能力,并抑制 JAK/STAT 信号通路的激活。PCAT6 在多种肿瘤中表达上调。PCAT6 通过激活 JAK/STAT 信号通路在 ESCC 中发挥癌基因作用。

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