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2001年至2010年中国河北省人群的毒力、分子遗传多样性、变异及进化

Virulence and molecular genetic diversity, variation, and evolution of the population in Hebei Province of China from 2001 to 2010.

作者信息

Zhang Lin, Zhang Linya, Meng Qingfang, Yan Hongfei, Liu Daqun

机构信息

College of Plant Protection, Hebei Agricultural University, Technological Innovation Center for Biological Control of Crop Diseases and Insect Pests of Hebei Province, Baoding, China.

School of Landscape and Ecological Engineering, Hebei Engineering University, Handan, China.

出版信息

Front Plant Sci. 2023 Mar 6;14:1095677. doi: 10.3389/fpls.2023.1095677. eCollection 2023.

Abstract

Wheat leaf rust, caused by , is one of the most important fungal diseases of wheat in China. However, little is known about the dynamic changes of population structure and genetic diversity of during a period of time. In this study, 247 isolates of collected from Hebei Province from 2001 to 2010 were tested on 36 Thatcher near-isogenic lines for virulence diversity and detected by 21 pairs of Expressed Sequence Tag derived Simple Sequence Repeat (EST-SSR) primers for genetic diversity. A total of 204 isolates were successfully identified as 164 races, and THTT, THST, PHRT, THTS, and PHTT were the most common races in Hebei Province from 2001 to 2010. The cluster analysis based on virulence showed that has a rich virulence polymorphism, which had a certain correlation with the years, while the cluster analysis based on EST-SSR showed that the genetic diversity of the population was significantly different between years in Hebei Province from 2001 to 2010. In addition, the population structure of may have changed greatly in 2007 and 2009, which was significantly different from that of 2001-2006 on either virulence or genetic characteristics. The variation frequency of the population structure had an increasing trend during this period. From 2001 to 2010, there was a certain degree of gene flow among the populations. No significant correlation was found between virulence and molecular polymorphism. The genetic differentiation analysis of the 10 tested populations (each year as a population) showed that the coefficient of genetic differentiation (Gst) was 0.27, indicating that there was a certain genetic differentiation among or within populations of in Hebei Province. The genetic variation within populations (73.08%) was higher than that among populations (26.92%), which indicated that the genetic variations were mainly found within populations. Our study provides the foundation for a better understanding of the population structure change and genetic diversity of over a period in Hebei Province of China.

摘要

由[病原菌名称未给出]引起的小麦叶锈病是中国小麦最重要的真菌病害之一。然而,在一段时间内关于[病原菌名称未给出]种群结构和遗传多样性的动态变化知之甚少。在本研究中,对2001年至2010年从河北省收集的247个[病原菌名称未给出]分离株在36个Thatcher近等基因系上进行毒力多样性测试,并通过21对表达序列标签衍生的简单序列重复(EST-SSR)引物进行遗传多样性检测。共成功鉴定出204个分离株为164个生理小种,THTT、THST、PHRT、THTS和PHTT是2001年至2010年河北省最常见的生理小种。基于毒力的聚类分析表明,[病原菌名称未给出]具有丰富的毒力多态性,与年份有一定相关性,而基于EST-SSR的聚类分析表明,2001年至2010年河北省[病原菌名称未给出]种群的遗传多样性在年份间存在显著差异。此外,[病原菌名称未给出]的种群结构在2007年和2009年可能发生了很大变化,在毒力或遗传特征上与2001 - 2006年有显著差异。在此期间种群结构的变异频率呈上升趋势。2001年至2010年,[病原菌名称未给出]种群之间存在一定程度的基因流动。毒力与分子多态性之间未发现显著相关性。对10个测试种群(每年作为一个种群)的遗传分化分析表明,遗传分化系数(Gst)为0.27,表明河北省[病原菌名称未给出]种群之间或种群内存在一定的遗传分化。种群内的遗传变异(73.08%)高于种群间的遗传变异(26.92%),这表明遗传变异主要存在于种群内。我们的研究为更好地了解中国河北省一段时间内[病原菌名称未给出]的种群结构变化和遗传多样性提供了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d66/10025498/39794b34fa87/fpls-14-1095677-g001.jpg

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