Suppr超能文献

ND132 中 ArsR 样调控因子对 的转录调控

Transcriptional Control of by an ArsR-Like Regulator in ND132.

机构信息

Smithsonian Environmental Research Center, Edgewater, Maryland, USA.

Biosciences Division, Oak Ridge National Lab, Oak Ridge, Tennessee, USA.

出版信息

Appl Environ Microbiol. 2023 Apr 26;89(4):e0176822. doi: 10.1128/aem.01768-22. Epub 2023 Mar 23.

Abstract

The gene pair encodes mercury (Hg) methylation capability in a diverse group of microorganisms, but its evolution and transcriptional regulation remain unknown. Working from the possibility that the evolutionary function of HgcAB may not be Hg methylation, we test a possible link to arsenic resistance. Using model Hg methylator Pseudodesulfovibrio mercurii ND132, we evaluated transcriptional control of by a putative ArsR encoded upstream and cotranscribed with . This regulator shares homology with ArsR repressors of arsenic resistance and -adenosylhomocysteine (SAH)-responsive regulators of methionine biosynthesis but is distinct from other ArsR/SahR proteins in . Using quantitative PCR (qPCR) and RNA sequencing (RNA-seq) transcriptome analyses, we confirmed this ArsR regulates transcription and is responsive to arsenic and SAH. Additionally, RNA-seq indicated a possible link between activity and arsenic transformations, with significant upregulation of other ArsR-regulated arsenic resistance operons alongside . Interestingly, wild-type ND132 was less sensitive to As(V) (but not As(III)) than an knockout strain, supporting the idea that may be linked to arsenic resistance. Arsenic significantly impacted rates of Hg methylation by ND132; however, responses varied with culture conditions. Differences in growth and metabolic activity did not account for arsenic impacts on methylation. While arsenic significantly increased expression, gene and transcript abundance was not a good predictor of Hg methylation rates. Taken together, these results support the idea that Hg and As cycling are linked in ND132. Our results may hold clues to the evolution of and the controls on Hg methylation in nature. This work reveals a link between microbial mercury methylation and arsenic resistance and may hold clues to the evolution of mercury methylation genes (). Microbes with produce methylmercury, a strong neurotoxin that readily accumulates in the food web. This study addresses a critical gap in our understanding about the environmental factors that control expression. We show that expression is controlled by an ArsR-like regulator responsive to both arsenic and -adenosylhomocysteine in our model organism, ND132. Exposure to arsenic also significantly impacted ND132 mercury methylation rates. However, expression of was not always a good predictor of Hg methylation rates, highlighting the roles of Hg bioavailability and other biochemical mechanisms in methylmercury production. This study improves our understanding of the controls on expression, which is needed to better predict environmental methylmercury production.

摘要

该基因对编码了一组微生物的汞(Hg)甲基化能力,但它的进化和转录调控仍不清楚。从 HgcAB 的进化功能可能不是 Hg 甲基化的可能性出发,我们测试了与砷抗性的可能联系。我们使用模型 Hg 甲基化菌 Pseudodesulfovibrio mercurii ND132 评估了假定的 ArsR 对 的转录控制,该 ArsR 编码在上游并与 共转录。这种调节剂与砷抗性的 ArsR 抑制剂和甲硫氨酸生物合成的 -腺苷同型半胱氨酸 (SAH) 反应调节剂具有同源性,但在 中与其他 ArsR/SahR 蛋白不同。使用定量 PCR (qPCR) 和 RNA 测序 (RNA-seq) 转录组分析,我们证实了 ArsR 调节 的转录,并对砷和 SAH 有反应。此外,RNA-seq 表明 活性与砷转化之间可能存在联系,伴随着其他 ArsR 调节的砷抗性操纵子的显著上调。有趣的是,野生型 ND132 对 As(V)(但不是 As(III))的敏感性低于 基因敲除菌株,这支持了 可能与砷抗性有关的观点。砷显著影响了 ND132 的 Hg 甲基化率;然而,反应随培养条件而变化。砷对甲基化的影响与生长和代谢活性无关。虽然砷显著增加了 的表达,但 基因和转录物丰度并不是 Hg 甲基化率的良好预测指标。总的来说,这些结果支持 Hg 和 As 循环在 ND132 中相互关联的观点。我们的结果可能为 Hg 甲基化基因在自然界中的进化和控制提供线索。这项工作揭示了微生物汞甲基化与砷抗性之间的联系,并可能为汞甲基化基因的进化提供线索。具有 的微生物会产生甲基汞,这是一种强烈的神经毒素,很容易在食物网中积累。本研究解决了我们对控制 表达的环境因素的理解中的一个关键差距。我们表明,在我们的模式生物 ND132 中,表达受 ArsR 样调节剂控制,该调节剂对砷和 -腺苷同型半胱氨酸都有反应。砷暴露也显著影响了 ND132 的汞甲基化率。然而, 的表达并不总是 Hg 甲基化率的良好预测指标,这突出了 Hg 生物利用度和其他生化机制在甲基汞产生中的作用。这项研究提高了我们对 表达控制的理解,这对于更好地预测环境甲基汞的产生是必要的。

相似文献

1
Transcriptional Control of by an ArsR-Like Regulator in ND132.ND132 中 ArsR 样调控因子对 的转录调控
Appl Environ Microbiol. 2023 Apr 26;89(4):e0176822. doi: 10.1128/aem.01768-22. Epub 2023 Mar 23.
6
sp. nov., a mercury-methylating bacterium isolated from sediment.新种,一种从沉积物中分离出的汞甲基化细菌。
Int J Syst Evol Microbiol. 2019 Jun;71(3). doi: 10.1099/ijsem.0.004697. Epub 2021 Feb 11.

本文引用的文献

5
ColabFold: making protein folding accessible to all.ColabFold:让蛋白质折叠变得人人可用。
Nat Methods. 2022 Jun;19(6):679-682. doi: 10.1038/s41592-022-01488-1. Epub 2022 May 30.
7
Highly accurate protein structure prediction with AlphaFold.利用 AlphaFold 进行高精度蛋白质结构预测。
Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15.
8
Introducing the ArsR-Regulated Arsenic Stimulon.介绍受ArsR调控的砷刺激基因集。
Front Microbiol. 2021 Mar 3;12:630562. doi: 10.3389/fmicb.2021.630562. eCollection 2021.
9
sp. nov., a mercury-methylating bacterium isolated from sediment.新种,一种从沉积物中分离出的汞甲基化细菌。
Int J Syst Evol Microbiol. 2019 Jun;71(3). doi: 10.1099/ijsem.0.004697. Epub 2021 Feb 11.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验