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计算方法预测蛋白质内无序区及其功能区。

Computational Methods to Predict Intrinsically Disordered Regions and Functional Regions in Them.

机构信息

Faculty of Engineering, Maebashi Institute of Technology, Maebashi, Japan.

Graduate School of Information Sciences, Nagoya University, Nagoya, Japan.

出版信息

Methods Mol Biol. 2023;2627:231-245. doi: 10.1007/978-1-0716-2974-1_13.

Abstract

Intrinsically disordered regions (IDRs) are protein regions that do not adopt fixed tertiary structures. Since these regions lack ordered three-dimensional structures, they should be excluded from the target portions of homology modeling. IDRs can be predicted from the amino acid sequences, because their amino acid compositions are different from that of the structured domains. This chapter provides a review of the prediction methods of IDRs and a case study of IDR prediction.

摘要

无规则区域(IDR)是指不采用固定三级结构的蛋白质区域。由于这些区域缺乏有序的三维结构,因此应将其从同源建模的目标部分中排除。可以根据氨基酸序列预测 IDR,因为它们的氨基酸组成与结构域不同。本章提供了对 IDR 预测方法的回顾和对 IDR 预测的案例研究。

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