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三耐鞘杆菌新种(Shouchella tritolerans sp. nov.),一种从海洋沉积物中分离出的兼性厌氧菌。

Shouchella tritolerans sp. nov., a facultative anaerobic bacterium isolated from marine sediments.

作者信息

Xie Cheng-Jie, Yang Shang, Han Shuang, Liu Guo-Hong, Zhou Shun-Gui

机构信息

Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, People's Republic of China.

Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, 510642, Guangdong, People's Republic of China.

出版信息

Arch Microbiol. 2023 Mar 24;205(4):137. doi: 10.1007/s00203-023-03474-3.

Abstract

An alkali, salt, and thermo-tolerant strain designated FJAT-45399 was isolated from marine sediment in Fujian Province, China. Strain FJAT-45399 was Gram-stain-positive, rod-shaped, and facultatively aerobic. It shared high 16S rRNA gene sequence similarities with the members of the genus Shouchella. Further, the phylogenetic and phylogenomic analysis also suggested strain FJAT-45399 clustered with the members of the genus Shouchella. Growth of strain FJAT-45399 was observed at 15-55 °C (optimum 45-50 °C), pH 7.0-13.0 (optimum 9.0) and 0-15% (w/v) NaCl (optimum 2%). It contained MK-7 as the menaquinone. The polar lipids were diphosphatidylglycerol (DPG), phosphatidylglycerol (PG) and an unidentified glycolipid (UGL) and lipid (UL). The major fatty acids (> 10%) were C (22.8%), iso-C (21.3%), and anteiso-C (14.0%). The genomic DNA G + C content was 44.5%. The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between strain FJAT-45399 and the most closely related type strain Shouchella clausii DSM 8716 (ANI 94.1% and dDDH 55.4%) were both below the cut-off level for species delineation. Based on the above results, strain FJAT-45399 represents a novel species of the genus Shouchella, for which the name Shouchella tritolerans sp. nov., is proposed. The type strain is FJAT-45399 (= GDMCC 1.3098 = JCM 35613).

摘要

从中国福建省海洋沉积物中分离出一株耐碱、耐盐且耐热的菌株,命名为FJAT-45399。菌株FJAT-45399革兰氏染色阳性,呈杆状,兼性需氧。它与寿氏菌属(Shouchella)成员具有较高的16S rRNA基因序列相似性。此外,系统发育和系统基因组分析也表明菌株FJAT-45399与寿氏菌属成员聚类在一起。在15-55°C(最适温度45-50°C)、pH 7.0-13.0(最适pH 9.0)和0-15%(w/v)NaCl(最适浓度2%)条件下观察到菌株FJAT-45399生长。它含有MK-7作为甲基萘醌。极性脂质为双磷脂酰甘油(DPG)、磷脂酰甘油(PG)以及一种未鉴定的糖脂(UGL)和脂质(UL)。主要脂肪酸(>10%)为C(22.8%)、异C(21.3%)和anteiso-C(14.0%)。基因组DNA的G+C含量为44.5%。菌株FJAT-45399与最密切相关的模式菌株克劳氏寿氏菌(Shouchella clausii)DSM 8716之间的平均核苷酸同一性(ANI)和数字DNA-DNA杂交(dDDH)值(ANI为94.1%,dDDH为55.4%)均低于物种划分的临界水平。基于上述结果,菌株FJAT-45399代表寿氏菌属的一个新物种,为此提出新名称三耐寿氏菌(Shouchella tritolerans sp. nov.)。模式菌株为FJAT-45399(=GDMCC 1.3098 = JCM 35613)。

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