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新种嗜热红树林沉积物芽孢杆菌,一种从红树林沉积物中分离出的嗜热细菌。

Bacillus litorisediminis sp. nov., a Thermophilic Bacterium Isolated from Mangrove Sediment.

作者信息

Tang Rong, Yang Shang, Han Shuang, Xie Cheng-Jie, Huang Guan-Min, Narsing Rao Manik Prabhu, Liu Guo-Hong, Zhou Shun-Gui

机构信息

Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou, Fujian, 350002, People's Republic of China.

Administrative Bureau of Zhangjiang Estuary Mangrove, National Nature Reserve Yunxiao Town, Yunxiao, Fujian, 363300, People's Republic of China.

出版信息

Curr Microbiol. 2023 Jan 19;80(2):79. doi: 10.1007/s00284-023-03180-9.

Abstract

Two aerobic, Gram-staining-positive, rod-shaped, endospore-forming, thermophilic bacterial strains, designated FJAT-47801 and FJAT-47835, were isolated from the sediment collected from Zhangjiang Estuary Mangrove National Nature Reserve in Fujian Province, China. Growth was observed at 25-55 °C (optimum, 50 °C) and pH 7.0-9.0 (optimum, pH 7.0), with up to 4.0% (w/v) NaCl (optimum, without NaCl). Strains FJAT-47801 and FJAT-47835 showed the highest 16S rRNA gene sequence similarity to Bacillus oleivorans (98.5%). The 16S rRNA gene sequence similarity between FJAT-47801 and FJAT-47835 was 99.9% indicating they were the same species. Phylogenetic (based on 16S rRNA gene sequences) and phylogenomic (based on 120 conserved bacterial single-copy genes) trees showed that strains FJAT-47801 and FJAT-47835 should be affiliated to the genus Bacillus. The of menaquinone of strain FJAT-47801 was MK-7. The major fatty acids of strain FJAT-47801 were iso-C, anteiso-C, iso-C, and C. The major polar lipids strain FJAT-47801 were phosphatidylethanolamine (PE), diphosphatidylglycerol (DPG), and phosphatidylglycerol (PG). The genomic DNA G+C content of strain FJAT-47801 was 39.3%. The average nucleotide identity (84.3%) and the digital DNA-DNA hybridization value (28.1%) between strain FJAT-47801 and B. oleivorans CCTCC AB 2013353 were below the cut-off level for species delineation. Based on the above results, strain FJAT-47801 represents a novel species of the genus Bacillus, for which the name Bacillus litorisediminis sp. nov., is proposed. The type strain is FJAT-47801 (=GDMCC 1.2712 = JCM 34875).

摘要

从中国福建省漳江口红树林国家级自然保护区采集的沉积物中分离出两株需氧、革兰氏染色阳性、杆状、产芽孢的嗜热细菌菌株,分别命名为FJAT-47801和FJAT-47835。在25-55℃(最适温度为50℃)和pH 7.0-9.0(最适pH为7.0)条件下可观察到菌株生长,NaCl浓度最高可达4.0%(w/v)(最适条件下无NaCl)。菌株FJAT-47801和FJAT-47835的16S rRNA基因序列与食油芽孢杆菌(Bacillus oleivorans)的相似度最高(98.5%)。FJAT-47801和FJAT-47835之间的16S rRNA基因序列相似度为99.9%,表明它们属于同一物种。系统发育树(基于16S rRNA基因序列)和系统基因组树(基于120个保守的细菌单拷贝基因)显示,菌株FJAT-47801和FJAT-47835应隶属于芽孢杆菌属。菌株FJAT-47801的甲基萘醌为MK-7。菌株FJAT-47801的主要脂肪酸为异-C、anteiso-C、异-C和C。菌株FJAT-47801的主要极性脂为磷脂酰乙醇胺(PE)、二磷脂酰甘油(DPG)和磷脂酰甘油(PG)。菌株FJAT-47801的基因组DNA G+C含量为39.3%。菌株FJAT-47801与食油芽孢杆菌CCTCC AB 2013353之间的平均核苷酸同一性(84.3%)和数字DNA-DNA杂交值(28.1%)低于物种划分的阈值水平。基于以上结果,菌株FJAT-47801代表芽孢杆菌属的一个新物种,提议将其命名为海岸消减量芽孢杆菌(Bacillus litorisediminis sp. nov.)。模式菌株为FJAT-47801(=GDMCC 1.2712 = JCM 34875)。

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