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人类癌症小鼠模型数据库 (MMHCdb)。

The Mouse Models of Human Cancer database (MMHCdb).

机构信息

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA.

出版信息

Dis Model Mech. 2023 Apr 1;16(4). doi: 10.1242/dmm.050001. Epub 2023 Apr 14.

Abstract

The laboratory mouse has served for decades as an informative animal model system for investigating the genetic and genomic basis of cancer in humans. Although thousands of mouse models have been generated, compiling and aggregating relevant data and knowledge about these models is hampered by a general lack of compliance, in the published literature, with nomenclature and annotation standards for genes, alleles, mouse strains and cancer types. The Mouse Models of Human Cancer database (MMHCdb) is an expertly curated, comprehensive knowledgebase of diverse types of mouse models of human cancer, including inbred mouse strains, genetically engineered mouse models, patient-derived xenografts, and mouse genetic diversity panels such as the Collaborative Cross. The MMHCdb is a FAIR-compliant knowledgebase that enforces nomenclature and annotation standards, and supports the completeness and accuracy of searches for mouse models of human cancer and associated data. The resource facilitates the analysis of the impact of genetic background on the incidence and presentation of different tumor types, and aids in the assessment of different mouse strains as models of human cancer biology and treatment response.

摘要

实验室小鼠几十年来一直是研究人类癌症遗传和基因组基础的重要动物模型系统。尽管已经生成了数千种小鼠模型,但由于在发表的文献中普遍缺乏基因、等位基因、小鼠品系和癌症类型的命名和注释标准,因此编译和汇总这些模型的相关数据和知识受到了阻碍。人类癌症小鼠模型数据库(MMHCdb)是一个经过精心整理的、全面的人类癌症不同类型小鼠模型知识库,包括近交系小鼠品系、基因工程小鼠模型、患者来源异种移植物以及小鼠遗传多样性面板,如协作交叉。MMHCdb 是一个符合 FAIR 原则的知识库,它执行命名和注释标准,并支持对人类癌症小鼠模型及其相关数据的搜索的完整性和准确性。该资源有助于分析遗传背景对不同肿瘤类型的发生率和表现的影响,并有助于评估不同的小鼠品系作为人类癌症生物学和治疗反应模型的适用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e05/10120068/c01cd054f8b1/dmm-16-050001-g1.jpg

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