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整合生物信息学分析鉴定缺血性脑卒中与 COVID-19 之间共同的免疫变化。

Integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and COVID 19.

机构信息

Eight-year program of Clinical Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China.

Department of Neurology, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.

出版信息

Front Immunol. 2023 Mar 8;14:1102281. doi: 10.3389/fimmu.2023.1102281. eCollection 2023.

Abstract

Although COVID-19 is primarily a respiratory disease, its neurological complications, such as ischemic stroke (IS), have aroused growing concerns and reports. However, the molecular mechanisms that underlie IS and COVID-19 are not well understood. Therefore, we implemented transcriptomic analysis from eight GEO datasets consist of 1191 samples to detect common pathways and molecular biomarkers in IS and COVID-19 that help understand the linkage between them. Differentially expressed genes (DEGs) were detected for IS and COVID-19 separately for finding shared mechanisms and we found that immune-related pathways were outlined with statistical significance. , which was identified as a hub gene, was supposed to be a potential therapeutic gene targets during the immunological process of COVID-19 and IS. Besides, we found a decrease in the proportion of CD8 T and T helper 2 cells in the peripheral circulation of both COVID and IS patients, and expression was significantly correlated with this change. In conclusion, we demonstrated that transcriptomic analyses reported in this study could make a deeper understanding of the common mechanism and might be promising for effective therapeutic for IS and COVID-19.

摘要

尽管 COVID-19 主要是一种呼吸道疾病,但它的神经系统并发症,如缺血性中风(IS),已经引起了越来越多的关注和报道。然而,IS 和 COVID-19 背后的分子机制还不是很清楚。因此,我们从包含 1191 个样本的 8 个 GEO 数据集实施了转录组分析,以检测 IS 和 COVID-19 中常见的通路和分子生物标志物,从而帮助理解它们之间的联系。我们分别为 IS 和 COVID-19 检测差异表达基因(DEGs),以寻找共同的机制,结果发现免疫相关途径具有统计学意义。被鉴定为枢纽基因,可能是 COVID-19 和 IS 免疫过程中的潜在治疗基因靶点。此外,我们发现 COVID 和 IS 患者外周循环中 CD8 T 和 T 辅助 2 细胞的比例下降,表达与这种变化显著相关。总之,我们证明了本研究报告的转录组分析可以更深入地了解共同机制,并可能为 IS 和 COVID-19 的有效治疗提供希望。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f2f6/10030956/b48712f356c4/fimmu-14-1102281-g001.jpg

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