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哥伦比亚医院分离株中抗黏菌素基因的鉴定及耐药机制的表征

Identification of Genes and Characterization of Resistance Mechanisms to Colistin in Isolates from Colombian Hospitals.

作者信息

De La Cadena Elsa, Mahecha Mateo, Velandia Ana María, García-Betancur Juan Carlos, Rojas Laura J, Porras Jessica, Pallares Christian, Villegas María Virginia

机构信息

Grupo de Investigación en Resistencia Antimicrobiana y Epidemiologia Hospitalaria, Universidad El Bosque, Bogotá 110121, Colombia.

Grupo de Investigación REMA, Facultad de Ciencias de la Salud, Programa de Bacteriología y Laboratorio Clínico, Universidad Colegio Mayor de Cundinamarca, Bogotá 110311, Colombia.

出版信息

Antibiotics (Basel). 2023 Mar 1;12(3):488. doi: 10.3390/antibiotics12030488.

Abstract

We report the presence of the gene among 880 clinical isolates collected in 13 hospitals from 12 Colombian cities between 2016 and 2019. Seven (0.8%) isolates were colistin resistant (MIC ≥ 4 µg/mL). These colistin-resistant isolates were screened for the presence of the gene; five carried the gene. These five isolates were subjected to whole genome sequencing (WGS) to identify additional resistomes and their ST. In addition, antimicrobial susceptibility testing revealed that all isolates carrying were susceptible to third generation-cephalosporin and carbapenems, except one, which carried an extended-spectrum β-lactamase (CTX-M-55), along with the fosfomycin resistance encoding gene, . WGS indicated that these isolates belonged to four distinct sequence types (ST58, ST46, ST393, and a newly described ST14315) and to phylogroups B1, A, and D. In this geographic region, the spread of in is low and has not been inserted into high-risk clones such as ST131, which has been present in the country longer.

摘要

我们报告了在2016年至2019年间从哥伦比亚12个城市的13家医院收集的880株临床分离株中该基因的存在情况。七株(0.8%)分离株对黏菌素耐药(最低抑菌浓度≥4 µg/mL)。对这些耐黏菌素分离株进行该基因筛查;五株携带该基因。对这五株分离株进行全基因组测序(WGS)以鉴定其他耐药基因组及其序列型。此外,抗菌药物敏感性测试显示,所有携带该基因的分离株对第三代头孢菌素和碳青霉烯类药物敏感,但有一株除外,该株携带超广谱β-内酰胺酶(CTX-M-55)以及磷霉素耐药编码基因。WGS表明这些分离株属于四种不同的序列型(ST58、ST46、ST393和新描述的ST14315)以及B1、A和D菌系。在该地理区域,该基因在这种细菌中的传播率较低,且尚未插入该国存在时间更长的高风险克隆株如ST131中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fb6/10044228/d5e910ffff38/antibiotics-12-00488-g001.jpg

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