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上皮-间质转化表达谱将人类胶质瘤分为两种不同的肿瘤免疫亚型。

Epithelial-Mesenchymal Transition Expression Profile Stratifies Human Glioma into Two Distinct Tumor-Immune Subtypes.

作者信息

Ren Changyuan, Chang Xin, Li Shouwei, Yan Changxiang, Fu Xiaojun

机构信息

Sanbo Brain Hospital, Capital Medical University, No. 50, Yikesong Road, Xiangshan, Haidian District, Beijing 100093, China.

出版信息

Brain Sci. 2023 Mar 5;13(3):447. doi: 10.3390/brainsci13030447.

DOI:10.3390/brainsci13030447
PMID:36979257
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10046881/
Abstract

Glioma is the primary tumor with the highest incidence and the worst prognosis in the human central nervous system. Epithelial-mesenchymal transition (EMT) and immune responses are two crucial processes that contribute to it having the worst prognosis. However, a comprehensive correlation between these two processes remains elusive. The mRNA expression profiles and corresponding clinical data of patients with glioma were downloaded from public databases. EMT-related genes were collected and provided in the dbEMT database. Risk scores, Lasso regression, and enrichment analysis were conducted for functional validation. In our study, we used unsupervised clustering of EMT gene expression profiles to classify gliomas into two subtypes. We assessed the reliability of this classification system by testing it in three independent cohorts. Each subtype had different clinical and immune system characteristics. The study suggests a possible link between EMT and immune responses in gliomas.

摘要

胶质瘤是人类中枢神经系统中发病率最高且预后最差的原发性肿瘤。上皮-间质转化(EMT)和免疫反应是导致其预后最差的两个关键过程。然而,这两个过程之间的全面相关性仍不清楚。从公共数据库下载了胶质瘤患者的mRNA表达谱和相应的临床数据。收集了与EMT相关的基因并在dbEMT数据库中提供。进行风险评分、套索回归和富集分析以进行功能验证。在我们的研究中,我们使用EMT基因表达谱的无监督聚类将胶质瘤分为两个亚型。我们通过在三个独立队列中进行测试来评估该分类系统的可靠性。每个亚型都有不同的临床和免疫系统特征。该研究表明胶质瘤中EMT与免疫反应之间可能存在联系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/180199f488f2/brainsci-13-00447-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/9db5026bb1d9/brainsci-13-00447-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/5490bf03ac53/brainsci-13-00447-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/44434bf8ca2d/brainsci-13-00447-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/272e8d57c994/brainsci-13-00447-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/cbbc0c718494/brainsci-13-00447-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/180199f488f2/brainsci-13-00447-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/9db5026bb1d9/brainsci-13-00447-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/5490bf03ac53/brainsci-13-00447-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/44434bf8ca2d/brainsci-13-00447-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/272e8d57c994/brainsci-13-00447-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/cbbc0c718494/brainsci-13-00447-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcf0/10046881/180199f488f2/brainsci-13-00447-g006.jpg

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Nomograms for predicting the overall survival of patients with cerebellar glioma: an analysis of the surveillance epidemiology and end results (SEER) database.预测小脑胶质瘤患者总生存期的列线图:监测、流行病学和最终结果(SEER)数据库分析。
Sci Rep. 2021 Sep 29;11(1):19348. doi: 10.1038/s41598-021-98960-3.
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Dynamic EMT: a multi-tool for tumor progression.
动态 EMT:肿瘤进展的多面手。
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Diffuse Glioma Heterogeneity and Its Therapeutic Implications.弥漫性胶质瘤的异质性及其治疗意义。
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Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries.《全球癌症统计数据 2020:全球 185 个国家和地区 36 种癌症的发病率和死亡率估计》。
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