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Dot/Icm 型四型分泌系统的结构与功能

Structure and Function of the Dot/Icm T4SS.

作者信息

Dutka Przemysław, Liu Yuxi, Maggi Stefano, Ghosal Debnath, Wang Jue, Carter Stephen D, Zhao Wei, Vijayrajratnam Sukhithasri, Vogel Joseph P, Jensen Grant J

机构信息

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.

Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA.

出版信息

bioRxiv. 2023 Mar 22:2023.03.22.533729. doi: 10.1101/2023.03.22.533729.

Abstract

The Dot/Icm type IV secretion system (T4SS) delivers effector proteins into host cells during infection. Despite its significance as a potential drug target, our current understanding of its atomic structure is limited to isolated subcomplexes. In this study, we used subtomogram averaging and integrative modeling to construct a nearly-complete model of the Dot/Icm T4SS accounting for seventeen protein components. We locate and provide insights into the structure and function of six new components including DotI, DotJ, DotU, IcmF, IcmT, and IcmX. We find that the cytosolic N-terminal domain of IcmF, a key protein forming a central hollow cylinder, interacts with DotU, providing insight into previously uncharacterized density. Furthermore, our model, in combination with analyses of compositional heterogeneity, explains how the cytoplasmic ATPase DotO is connected to the periplasmic complex via interactions with membrane-bound DotI/DotJ proteins. Coupled with infection data, our model offers new insights into the T4SS-mediated secretion mechanism.

摘要

Dot/Icm IV型分泌系统(T4SS)在感染过程中将效应蛋白输送到宿主细胞中。尽管其作为潜在药物靶点具有重要意义,但我们目前对其原子结构的了解仅限于分离的亚复合物。在本研究中,我们使用亚断层平均和整合建模构建了一个几乎完整的Dot/Icm T4SS模型,该模型包含十七种蛋白质成分。我们定位并深入了解了六个新成分的结构和功能,包括DotI、DotJ、DotU、IcmF、IcmT和IcmX。我们发现,形成中央空心圆柱体的关键蛋白IcmF的胞质N端结构域与DotU相互作用,为先前未表征的密度提供了见解。此外,我们的模型结合组成异质性分析,解释了细胞质ATP酶DotO如何通过与膜结合的DotI/DotJ蛋白相互作用与周质复合物相连。结合感染数据,我们的模型为T4SS介导的分泌机制提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3579/10055428/45bcd761730d/nihpp-2023.03.22.533729v1-f0001.jpg

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