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MYB 在预后和免疫方面的作用:从膀胱癌验证到泛癌分析。

The prognostic and immunological role of MYB: from bladder cancer validation to pan-cancer analysis.

机构信息

Department of Urology, Ningbo Medical Center Lihuili Hospital, Ningbo, Zhejiang 315000, P.R. China.

Department of Nephrology, Ningbo Medical Center Lihuili Hospital, Ningbo, Zhejiang 315000, P.R. China.

出版信息

Biosci Rep. 2023 Apr 26;43(4). doi: 10.1042/BSR20222627.

Abstract

BACKGROUND

MYB proto-oncogene is verified as a transcription factor. Although emerging evidence showed that MYB plays a critical part in tumor progression and immunity, a systematic pan-cancer analysis of MYB still remains to be performed for determining whether MYB could serve as a biomarker for cancer screening, prognosis prediction and accurate therapy design in various human cancers.

METHODS

In the present study, we performed qRT-PCR, wound healing assay and transwell assay to validate the expression level and biological function of MYB in bladder cancer. Then, we utilized several open-source databases including UCSC Xena database, TCGA, GTEx, etc. Online tools was used to process the raw data from UCSC Xena database.

RESULTS

We found that the expression level of MYB is significantly higher in bladder cancer cell lines than urothelial cells. Further experiments confirmed that overexpression of MYB enhanced the ability of migration in bladder cancer. Next, we found that the expression level of MYB is significantly higher in most cancers. Meanwhile, MYB expression was positively or negatively related with the prognosis in different cancer types. In addition, MYB expression is significantly related to immune score and immune cells in most cancer types. Moreover, MYB act as an immunotherapy biomarker superior to several traditional immunotherapy biomarkers. Finally, deep deletion was the most frequent genetic alteration of MYB.

CONCLUSION

MYB may serve as a powerful biomarker for tumor screening, prognostic, individualized treatment strategy in a broad range of malignancies.

摘要

背景

MYB 原癌基因已被证实为一种转录因子。虽然有新的证据表明 MYB 在肿瘤进展和免疫中起着关键作用,但仍需要对其进行系统的泛癌症分析,以确定 MYB 是否可以作为各种人类癌症的癌症筛查、预后预测和精确治疗设计的生物标志物。

方法

在本研究中,我们通过 qRT-PCR、划痕愈合实验和 Transwell 实验验证了 MYB 在膀胱癌中的表达水平和生物学功能。然后,我们利用了包括 UCSC Xena 数据库、TCGA、GTEx 等在内的多个公开数据库。使用在线工具处理 UCSC Xena 数据库中的原始数据。

结果

我们发现 MYB 在膀胱癌细胞系中的表达水平明显高于尿路上皮细胞。进一步的实验证实,MYB 的过表达增强了膀胱癌的迁移能力。接下来,我们发现 MYB 在大多数癌症中的表达水平明显更高。同时,在不同的癌症类型中,MYB 的表达与预后呈正相关或负相关。此外,在大多数癌症类型中,MYB 的表达与免疫评分和免疫细胞显著相关。此外,MYB 作为一种免疫治疗生物标志物,优于几种传统的免疫治疗生物标志物。最后,深度缺失是 MYB 最常见的遗传改变。

结论

MYB 可能作为一种强大的生物标志物,用于广泛的恶性肿瘤的肿瘤筛查、预后和个体化治疗策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ccaa/10086116/7930846b1ed9/bsr-43-bsr20222627-g1.jpg

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