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半胱氨酸天冬氨酸蛋白酶 8 变体和单倍型对乳腺癌风险和预后的遗传贡献:伊朗的病例对照研究。

Genetic contribution of caspase-8 variants and haplotypes to breast cancer risk and prognosis: a case-control study in Iran.

机构信息

Department of Medical Genetics and Molecular Medicine, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.

Midwifery department, Faculty of Nursing and Midwifery, Mashhad University of Medical Sciences, Mashhad, Iran.

出版信息

BMC Med Genomics. 2023 Apr 4;16(1):72. doi: 10.1186/s12920-023-01484-0.

Abstract

PURPOSE

Multiple genome-wide and candidate-gene association studies have been conducted to search for common risk variants of breast cancer. Recent large meta-analyses and consolidating evidence have highlighted the role of the caspase-8 gene in breast cancer pathogenesis. Therefore, this study aimed to identify common variations and haplotypes associated with risk and overall survival of breast cancer with respect to underlying susceptibility variants in the CASP8 gene region in a group of the Iranian population.

METHODS

In a case-control study with a total of 1008 samples (455 cases and 553 controls), genotyping of 12 candidate polymorphisms, consisting of rs3834129, rs2037815, rs7608692, rs12990906, rs3769821, rs6435074, rs3754934, rs3817578, rs10931936, rs1045485, rs1045487, and rs13113, were performed using PCR-based methods, including ARMS-PCR, AS-PCR, RFLP-PCR, HRM-PCR, and TaqMan-PCR.

RESULTS

rs3834129, rs3754934, rs12990906, and rs10931936 were associated with the risk and overall survival of breast cancer. Several haplotypes were also identified an associated with a higher risk of breast cancer, including a three-SNP haplotype rs3817578-rs10931936-rs1045485 [p < 0.001, OR = 1.78(1.32-2.41)]. rs3754934-C allele showed an association with a lower risk of death in all patients [p = 0.022; HR = 0.46(0.23-0.89)] and in the hormone-receptor-positive group [p = 0.038; HR = 0.37(0.14-0.95)], as well as CC genotype in the hormone-receptor-positive group [p = 0.002; HR = 0.09(0.02-0.43)].

CONCLUSION

The present study suggests a diagnostic and prognostic role of CASP8 gene variations in breast cancer. The risky haplotypes are likely to have one or more underlying breast cancer susceptibility alleles. Understanding the mode of action of these alleles will aid individual-level risk prediction. It also may help identify at-risk patients to provide them with better surveillance.

摘要

目的

已经进行了多项全基因组和候选基因关联研究,以寻找乳腺癌的常见风险变异。最近的大型荟萃分析和综合证据强调了半胱氨酸天冬氨酸蛋白酶 8 基因(caspase-8 gene)在乳腺癌发病机制中的作用。因此,本研究旨在鉴定与 CASP8 基因区域中潜在易感性变异相关的常见变异和单倍型,以评估其与伊朗人群乳腺癌风险和总生存的关系。

方法

在一项共 1008 例样本(455 例病例和 553 例对照)的病例对照研究中,采用 PCR 方法(包括 ARMS-PCR、AS-PCR、RFLP-PCR、HRM-PCR 和 TaqMan-PCR)对 12 个候选多态性(rs3834129、rs2037815、rs7608692、rs12990906、rs3769821、rs6435074、rs3754934、rs3817578、rs10931936、rs1045485、rs1045487 和 rs13113)进行了基因分型。

结果

rs3834129、rs3754934、rs12990906 和 rs10931936 与乳腺癌的风险和总生存相关。还鉴定了几个与乳腺癌风险升高相关的单倍型,包括三个 SNP 单倍型 rs3817578-rs10931936-rs1045485 [p<0.001,OR=1.78(1.32-2.41)]。rs3754934-C 等位基因与所有患者的死亡风险降低相关(p=0.022;HR=0.46(0.23-0.89)]和激素受体阳性组(p=0.038;HR=0.37(0.14-0.95)],以及激素受体阳性组的 CC 基因型(p=0.002;HR=0.09(0.02-0.43)]。

结论

本研究提示 CASP8 基因变异在乳腺癌中具有诊断和预后作用。风险单倍型可能具有一个或多个潜在的乳腺癌易感性等位基因。了解这些等位基因的作用模式将有助于个体水平的风险预测。它还可能有助于识别高危患者,为他们提供更好的监测。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e76a/10071634/6c026f1a8169/12920_2023_1484_Fig1_HTML.jpg

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