Wang Feng, Zhu Lei
Department of Radiotherapy, Shanghai Fourth People's Hospital, School of Medicine, Tongji University, No. 1878, Sichuan North Road, Shanghai, 200081, China.
Department of Thoracic Surgery, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, 507 Zhengmin Road, Shanghai, 200433, China.
Heliyon. 2023 Mar 17;9(4):e14614. doi: 10.1016/j.heliyon.2023.e14614. eCollection 2023 Apr.
Phenotypic plasticity (PP) is a major promoter of tumor metastasis and drug resistance. Nevertheless, the molecular features and clinical significance of phenotypic plasticity in lung squamous cell carcinomas (LSCC) remained largely unexplored.
Phenotypic plasticity-related genes (PPRG) and clinical information of LSCC were downloaded from the cancer genome atlas (TCGA). The expression profiles of PPRG were compared between patients with and without lymph node metastasis. The prognostic signature was constructed, and survival analysis was performed based on phenotypic plasticity. Immunotherapy responses, chemotherapeutic drugs and targeted drug responses were investigated. In addition, the results were verified in an external cohort.
Patients with and without lymph node metastasis exhibited significantly different genomic characteristics of phenotypic plasticity. Enrichment analysis showed that PP was strongly associated with cell responses and cell contraction. Survival analysis demonstrated that PPRG could serve as independent prognostic factor for overall survival. The phenotypic plasticity-related signature successfully divided patients into high- and low-PP score groups. Patients with low-PP scores were more sensitive to PD-L1, Cisplatin, Gefitinib, Obatoclax. Mesylate, Paclitaxel, Sorafenib and Vinorelbine (all p < 0.05). While, patients with low-PP scores were more sensitive to Axitinib and Camptothecin (all p < 0.05). Consistent with the results from TCGA, the external cohort validated the above findings.
Our study revealed that phenotypic plasticity may be involved in the lymph node metastasis in LSCC through regulating cell responses and cell contraction. Evaluation of phenotypic plasticity will assist clinicians in making treatment strategies.
表型可塑性(PP)是肿瘤转移和耐药性的主要促进因素。然而,肺鳞状细胞癌(LSCC)中表型可塑性的分子特征和临床意义在很大程度上仍未得到探索。
从癌症基因组图谱(TCGA)下载LSCC的表型可塑性相关基因(PPRG)和临床信息。比较有和无淋巴结转移患者的PPRG表达谱。构建预后特征,并基于表型可塑性进行生存分析。研究免疫治疗反应、化疗药物和靶向药物反应。此外,在外部队列中验证结果。
有和无淋巴结转移的患者表现出明显不同的表型可塑性基因组特征。富集分析表明,PP与细胞反应和细胞收缩密切相关。生存分析表明,PPRG可作为总生存的独立预后因素。表型可塑性相关特征成功地将患者分为高PP评分组和低PP评分组。低PP评分的患者对PD-L1、顺铂、吉非替尼、甲磺酸奥巴托卡星、紫杉醇、索拉非尼和长春瑞滨更敏感(所有p<0.05)。而低PP评分的患者对阿昔替尼和喜树碱更敏感(所有p<0.05)。与TCGA的结果一致,外部队列验证了上述发现。
我们的研究表明,表型可塑性可能通过调节细胞反应和细胞收缩参与LSCC的淋巴结转移。评估表型可塑性将有助于临床医生制定治疗策略。