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多叶片样本提取系统(MuLES):一种改进叶片自动形态测量研究的工具。

Multiple Leaf Sample Extraction System (MuLES): A tool to improve automated morphometric leaf studies.

作者信息

Bowman Christian S, Traband Ryan, Wang Xuesong, Knowles Sara P, Lo Sassoum, Jia Zhenyu, Vorsa Nicholi, Herniter Ira A

机构信息

Department of Botany and Plant Sciences University of California Riverside, 2142 Batchelor Hall Riverside California 92521 USA.

Department of Plant Biology Rutgers University 59 Dudley Road New Brunswick New Jersey 08901 USA.

出版信息

Appl Plant Sci. 2023 Mar 21;11(2):e11513. doi: 10.1002/aps3.11513. eCollection 2023 Mar-Apr.

DOI:10.1002/aps3.11513
PMID:37051583
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10083438/
Abstract

PREMISE

The measurement of leaf morphometric parameters from digital images can be time-consuming or restrictive when using digital image analysis softwares. The Multiple Leaf Sample Extraction System (MuLES) is a new tool that enables high-throughput leaf shape analysis with minimal user input or prerequisites, such as coding knowledge or image modification.

METHODS AND RESULTS

MuLES uses contrasting pixel color values to distinguish between leaf objects and their background area, eliminating the need for color threshold-based methods or color correction cards typically required in other software methods. The leaf morphometric parameters measured by this software, especially leaf aspect ratio, were able to distinguish between large populations of different accessions for the same species in a high-throughput manner.

CONCLUSIONS

MuLES provides a simple method for the rapid measurement of leaf morphometric parameters in large plant populations from digital images and demonstrates the ability of leaf aspect ratio to distinguish between closely related plant types.

摘要

前提

在使用数字图像分析软件时,从数字图像中测量叶片形态参数可能既耗时又有局限性。多叶样本提取系统(MuLES)是一种新工具,它能够以最少的用户输入或前提条件(如编码知识或图像修改)实现高通量叶片形状分析。

方法与结果

MuLES利用对比像素颜色值来区分叶片对象及其背景区域,无需其他软件方法通常所需的基于颜色阈值的方法或颜色校正卡。该软件测量的叶片形态参数,尤其是叶长宽比,能够以高通量方式区分同一物种的大量不同种质。

结论

MuLES提供了一种从数字图像中快速测量大型植物群体叶片形态参数的简单方法,并证明了叶长宽比区分密切相关植物类型的能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d4b/10083438/633dafb6cde8/APS3-11-e11513-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d4b/10083438/f2bcbcd4dc7d/APS3-11-e11513-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d4b/10083438/633dafb6cde8/APS3-11-e11513-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d4b/10083438/f2bcbcd4dc7d/APS3-11-e11513-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d4b/10083438/633dafb6cde8/APS3-11-e11513-g002.jpg

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本文引用的文献

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Leaf width gene LW5/D1 affects plant architecture and yield in rice by regulating nitrogen utilization efficiency.叶片宽度基因 LW5/D1 通过调节氮利用效率影响水稻的植株结构和产量。
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甘薯(Ipomoea batatas)叶片形状显著的形态多样性:遗传、环境及基因与环境互作的影响
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Appl Plant Sci. 2019 Sep 19;7(9):e11288. doi: 10.1002/aps3.11288. eCollection 2019 Sep.
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Experimental evidence for species-dependent responses in leaf shape to temperature: Implications for paleoclimate inference.实验证据表明,叶片形状对温度的响应具有物种依赖性:对古气候推断的启示。
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