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正常创伤愈合过程中表达的 microRNAs 及其相关途径:系统评价和生物信息学分析。

MicroRNAs expressed during normal wound healing and their associated pathways: A systematic review and bioinformatics analysis.

机构信息

Graduated Program in Biochemistry and Bioprospecting, Federal University of Pelotas, Pelotas, RS, Brazil.

Graduated Program in Health and Behavior, Catholic University of Pelotas, Pelotas, RS, Brazil.

出版信息

PLoS One. 2023 Apr 13;18(4):e0281913. doi: 10.1371/journal.pone.0281913. eCollection 2023.

Abstract

MicroRNAs (miRNAs) are responsible for regulating gene expression post-transcriptionally. Are involved in several biological processes, such as wound healing. Understanding the miRNAs involved in this process is fundamental for the development of new therapies. So, due to the need to understand the role of these molecules, we aimed systematically review the literature in order to identify which miRNAs are involved in the wound healing and determine, through bioinformatics analysis, which signaling pathways are associated with these miRNAs. An electronic search was performed in the following databases: National Library of Medicine National Institutes of Health (PubMed), Science Direct, Scifinder, Scopus and Web of Science, using the descriptors: "(microRNA [MeSH])" and "(skin [MeSH])" and "(wound healing [MeSH])". After the search, two independent and previously calibrated reviewers selected the articles that analyzed the expression pattern of miRNAs in wound healing in in vivo studies, using the software Zotero bibliography manager. Following, bioinformatic analysis was performed using the software DIANA Tools, mirPath v.3 and the data was interpreted. The bioinformatics analysis revealed that on the day 1 there were 13 union pathways, eight of which were statistically significant. Still on the day 1, among the miRNAs that had a decrease in their expression, 12 of 17 union pathways found were statistically significant. On the day 5, among the miRNAs with an increase in expression, 16 union pathways were found, 12 of which were statistically significant. Finally, among the miRNAs with decreased expression, 11 of 15 union pathways found were statistically significant. Although it has been found substantial heterogeneity in the studies, with this systematic review, it was possible to study the panorama of miRNAs that may be altered in the wound healing. The present review summarizes existing evidence of miRNAs associated to wound healing, and these findings can contribute to new therapeutic approaches.

摘要

微小 RNA(miRNAs)负责转录后调控基因表达。参与了多个生物学过程,如伤口愈合。了解参与这一过程的 miRNAs 对于开发新疗法至关重要。因此,由于需要了解这些分子的作用,我们旨在系统地综述文献,以确定哪些 miRNAs 参与了伤口愈合,并通过生物信息学分析确定与这些 miRNAs 相关的信号通路。在以下数据库中进行了电子检索:美国国立卫生研究院国家医学图书馆(PubMed)、Science Direct、Scifinder、Scopus 和 Web of Science,使用的检索词为:“(microRNA [MeSH])”和“(skin [MeSH])”和“(wound healing [MeSH])”。搜索后,两名独立且经过校准的评审员使用 Zotero 文献管理软件选择了分析体内研究中 miRNA 在伤口愈合中表达模式的文章。随后,使用 DIANA Tools、mirPath v.3 等生物信息学分析软件进行分析,并对数据进行解释。生物信息学分析表明,在第 1 天有 13 个联合途径,其中 8 个具有统计学意义。在第 1 天,在表达下降的 miRNA 中,有 17 个联合途径中有 12 个具有统计学意义。在第 5 天,在表达增加的 miRNA 中,有 16 个联合途径,其中 12 个具有统计学意义。最后,在表达下降的 miRNA 中,有 15 个联合途径中有 11 个具有统计学意义。尽管研究中发现了相当大的异质性,但通过这项系统综述,我们可以研究可能在伤口愈合中发生改变的 miRNAs 全景。本综述总结了与伤口愈合相关的 miRNA 的现有证据,这些发现可以为新的治疗方法做出贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fa0/10101427/c6f6bbccd814/pone.0281913.g001.jpg

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