青少年大脑认知发展研究的基因型数据和衍生遗传工具,以更好地理解人类大脑发育。

Genotype Data and Derived Genetic Instruments of Adolescent Brain Cognitive Development Study for Better Understanding of Human Brain Development.

机构信息

Center for Population Neuroscience and Genetics, Laureate Institute for Brain Research, Tulsa, USA.

Department of Radiology, School of Medicine, University of California, San Diego, San Diego, USA.

出版信息

Behav Genet. 2023 May;53(3):159-168. doi: 10.1007/s10519-023-10143-0. Epub 2023 Apr 24.

Abstract

The data release of Adolescent Brain Cognitive Development (ABCD) Study represents an extensive resource for investigating factors relating to child development and mental wellbeing. The genotype data of ABCD has been used extensively in the context of genetic analysis, including genome-wide association studies and polygenic score predictions. However, there are unique opportunities provided by ABCD genetic data that have not yet been fully tapped. The diverse genomic variability, the enriched relatedness among ABCD subsets, and the longitudinal design of the ABCD challenge researchers to perform novel analyses to gain deeper insight into human brain development. Genetic instruments derived from the ABCD genetic data, such as genetic principal components, can help to better control confounds beyond the context of genetic analyses. To facilitate the use genomic information in the ABCD for inference, we here detail the processing procedures, quality controls, general characteristics, and the corresponding resources in the ABCD genotype data of release 4.0.

摘要

ABCD 研究的数据集代表了一个广泛的资源,可用于研究与儿童发展和心理健康相关的因素。ABCD 的基因型数据已被广泛用于遗传分析,包括全基因组关联研究和多基因评分预测。然而,ABCD 遗传数据提供了一些尚未充分利用的独特机会。ABCD 遗传数据中的多样性基因组变异、ABCD 子集中丰富的相关性以及 ABCD 的纵向设计,都要求研究人员进行新的分析,以更深入地了解人类大脑发育。从 ABCD 遗传数据中得出的遗传工具,如遗传主成分,可以帮助更好地控制遗传分析之外的混杂因素。为了促进在 ABCD 中使用基因组信息进行推断,我们在这里详细介绍了 4.0 版 ABCD 基因型数据的处理程序、质量控制、一般特征和相应资源。

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