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滞后时间与增长率之间的权衡关系驱动了质粒获取成本。

Tradeoff between lag time and growth rate drives the plasmid acquisition cost.

机构信息

Department of Biology, Barnard College, New York, NY, 10027, USA.

Department of Medicine, Division of Infectious Diseases, Columbia University Medical Center, New York, NY, 10032, USA.

出版信息

Nat Commun. 2023 Apr 24;14(1):2343. doi: 10.1038/s41467-023-38022-6.

Abstract

Conjugative plasmids drive genetic diversity and evolution in microbial populations. Despite their prevalence, plasmids can impose long-term fitness costs on their hosts, altering population structure, growth dynamics, and evolutionary outcomes. In addition to long-term fitness costs, acquiring a new plasmid introduces an immediate, short-term perturbation to the cell. However, due to the transient nature of this plasmid acquisition cost, a quantitative understanding of its physiological manifestations, overall magnitudes, and population-level implications, remains unclear. To address this, here we track growth of single colonies immediately following plasmid acquisition. We find that plasmid acquisition costs are primarily driven by changes in lag time, rather than growth rate, for nearly 60 conditions covering diverse plasmids, selection environments, and clinical strains/species. Surprisingly, for a costly plasmid, clones exhibiting longer lag times also achieve faster recovery growth rates, suggesting an evolutionary tradeoff. Modeling and experiments demonstrate that this tradeoff leads to counterintuitive ecological dynamics, whereby intermediate-cost plasmids outcompete both their low and high-cost counterparts. These results suggest that, unlike fitness costs, plasmid acquisition dynamics are not uniformly driven by minimizing growth disadvantages. Moreover, a lag/growth tradeoff has clear implications in predicting the ecological outcomes and intervention strategies of bacteria undergoing conjugation.

摘要

共轭质粒驱动微生物种群的遗传多样性和进化。尽管它们很普遍,但质粒会给宿主带来长期的适应度成本,改变种群结构、生长动态和进化结果。除了长期的适应度成本外,获得新的质粒会立即对细胞产生短期的干扰。然而,由于这种质粒获得成本的瞬时性质,其生理表现、总体幅度和群体水平的影响仍不清楚。为了解决这个问题,我们在这里跟踪质粒获得后单个菌落的生长情况。我们发现,对于近 60 种不同的质粒、选择环境和临床菌株/种,质粒获得成本主要是由延迟时间的变化驱动的,而不是生长速率的变化。令人惊讶的是,对于一个代价高昂的质粒,延迟时间较长的克隆也能更快地恢复生长速度,这表明存在一种进化权衡。模型和实验表明,这种权衡导致了反直觉的生态动态,即中间代价的质粒比低代价和高代价的质粒更具竞争力。这些结果表明,与适应度成本不同,质粒获得动态并不是由最小化生长劣势驱动的。此外,延迟/生长权衡对于预测经历共轭的细菌的生态结果和干预策略具有明显的意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff1f/10126158/5d4912717fb6/41467_2023_38022_Fig1_HTML.jpg

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