Altoé Lorena Souza Castro, de Araújo Costa Ethe, Tavares Gabriella Peterlini, Rocha Márcio Santos, Queiroz José Humberto de, Gonçalves Juliana Barbosa Coitinho, de Figueiredo Suely Gomes, de Araújo Jackson Victor
Departamento de Veterinária, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
Departamento de Física, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
Arch Microbiol. 2023 Apr 27;205(5):208. doi: 10.1007/s00203-023-03551-7.
The use of force spectroscopy approaches performed with optical tweezers can be very useful in determining the binding modes and the physical chemistry of DNA interactions with ligands, from small drugs to proteins. Helminthophagous fungi, on the other hand, have important enzyme secretion mechanisms for various purposes, and the interactions between such enzymes and nucleic acids are very poorly studied. Therefore, the main goal of the present work was to investigate, at the molecular level, the mechanisms of interaction between fungal serine proteases and the double-stranded (ds) DNA molecule. Experimental assays performed with this single molecule technique consist in exposing different concentrations of the protease of this fungus to dsDNA until saturation while monitoring the changes on the mechanical properties of the macromolecular complexes formed, from where the physical chemistry of the interaction can be deduced. It was found that the protease binds strongly to the double-helix, forming aggregates and changing the persistence length of the DNA molecule. The present work thus allowed us to infer information at the molecular level on the pathogenicity of these proteins, an important class of biological macromolecules, when applied to a target specimen.
使用光镊进行的力谱学方法在确定DNA与配体(从小分子药物到蛋白质)的结合模式和物理化学性质方面可能非常有用。另一方面,食虫真菌具有用于各种目的的重要酶分泌机制,而此类酶与核酸之间的相互作用研究得非常少。因此,本研究的主要目标是在分子水平上研究真菌丝氨酸蛋白酶与双链(ds)DNA分子之间的相互作用机制。用这种单分子技术进行的实验分析包括将不同浓度的这种真菌蛋白酶暴露于dsDNA直至饱和,同时监测形成的大分子复合物的力学性质变化,从中可以推断相互作用的物理化学性质。研究发现,该蛋白酶与双螺旋强烈结合,形成聚集体并改变DNA分子的持久长度。因此,本研究使我们能够在分子水平上推断这些蛋白质(一类重要的生物大分子)应用于目标标本时的致病性信息。