Conservation Genetics, San Diego Zoo Wildlife Alliance, Escondido, CA 92027, USA.
Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, CA 95064, USA.
Science. 2023 Apr 28;380(6643):eabn5856. doi: 10.1126/science.abn5856.
Species persistence can be influenced by the amount, type, and distribution of diversity across the genome, suggesting a potential relationship between historical demography and resilience. In this study, we surveyed genetic variation across single genomes of 240 mammals that compose the Zoonomia alignment to evaluate how historical effective population size () affects heterozygosity and deleterious genetic load and how these factors may contribute to extinction risk. We find that species with smaller historical carry a proportionally larger burden of deleterious alleles owing to long-term accumulation and fixation of genetic load and have a higher risk of extinction. This suggests that historical demography can inform contemporary resilience. Models that included genomic data were predictive of species' conservation status, suggesting that, in the absence of adequate census or ecological data, genomic information may provide an initial risk assessment.
物种的存续可能受到基因组中多样性的数量、类型和分布的影响,这表明历史人口动态和恢复力之间可能存在潜在关系。在这项研究中,我们调查了构成 Zoonomia 比对的 240 种哺乳动物的单基因组中的遗传变异,以评估历史有效种群大小 (Ne) 如何影响杂合性和有害遗传负荷,以及这些因素如何导致灭绝风险。我们发现,由于遗传负荷的长期积累和固定,历史 Ne 较小的物种携带比例更大的有害等位基因负担,并且灭绝的风险更高。这表明历史人口动态可以为当代恢复力提供信息。包含基因组数据的模型可以预测物种的保护状况,这表明,在缺乏充分的普查或生态数据的情况下,基因组信息可能提供初始风险评估。