Department of Gynecology and Obstetrics and Human Reproduction, CHU Rennes, Rennes, France.
INSERM, LTSI - UMR 1099, University Rennes 1, Rennes, France.
Surg Endosc. 2023 Jun;37(6):4298-4314. doi: 10.1007/s00464-023-10041-w. Epub 2023 May 8.
Annotated data are foundational to applications of supervised machine learning. However, there seems to be a lack of common language used in the field of surgical data science. The aim of this study is to review the process of annotation and semantics used in the creation of SPM for minimally invasive surgery videos.
For this systematic review, we reviewed articles indexed in the MEDLINE database from January 2000 until March 2022. We selected articles using surgical video annotations to describe a surgical process model in the field of minimally invasive surgery. We excluded studies focusing on instrument detection or recognition of anatomical areas only. The risk of bias was evaluated with the Newcastle Ottawa Quality assessment tool. Data from the studies were visually presented in table using the SPIDER tool.
Of the 2806 articles identified, 34 were selected for review. Twenty-two were in the field of digestive surgery, six in ophthalmologic surgery only, one in neurosurgery, three in gynecologic surgery, and two in mixed fields. Thirty-one studies (88.2%) were dedicated to phase, step, or action recognition and mainly relied on a very simple formalization (29, 85.2%). Clinical information in the datasets was lacking for studies using available public datasets. The process of annotation for surgical process model was lacking and poorly described, and description of the surgical procedures was highly variable between studies.
Surgical video annotation lacks a rigorous and reproducible framework. This leads to difficulties in sharing videos between institutions and hospitals because of the different languages used. There is a need to develop and use common ontology to improve libraries of annotated surgical videos.
标注数据是监督机器学习应用的基础。然而,在外科数据科学领域似乎缺乏通用语言。本研究旨在回顾微创外科视频中 SPM 创建过程中的注释和语义。
本系统评价回顾了 2000 年 1 月至 2022 年 3 月期间 MEDLINE 数据库中索引的文章。我们选择了使用外科视频注释来描述微创外科领域手术过程模型的文章。我们排除了仅关注器械检测或识别解剖区域的研究。使用纽卡斯尔-渥太华质量评估工具评估偏倚风险。使用 SPIDER 工具以表格形式直观呈现研究数据。
在 2806 篇文章中,有 34 篇被选作综述。其中 22 篇是消化外科领域,6 篇是眼科手术领域,1 篇是神经外科领域,3 篇是妇科手术领域,2 篇是混合领域。31 篇研究(88.2%)致力于阶段、步骤或动作识别,主要依赖于非常简单的形式化(29 篇,85.2%)。使用现有公共数据集的研究缺乏数据集的临床信息。外科过程模型的注释过程缺乏且描述不佳,研究之间的手术过程描述差异很大。
外科视频注释缺乏严格且可重复的框架。这导致机构和医院之间难以共享视频,因为使用的语言不同。需要开发和使用通用本体论来改进标注外科视频库。