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mfeeU-Net:一种用于从 CT 图像中自动进行肝脏分割的多尺度特征提取和增强 U-Net。

mfeeU-Net: A multi-scale feature extraction and enhancement U-Net for automatic liver segmentation from CT Images.

机构信息

Department of Information Engineering, Nanchang Hangkong University, Nanchang 330063, Jiangxi, China.

Department of Radiology, Feinberg School of Medicine, Northwestern University, Chicago 60611, Illinois, U.S.

出版信息

Math Biosci Eng. 2023 Feb 21;20(5):7784-7801. doi: 10.3934/mbe.2023336.

Abstract

Medical image segmentation of the liver is an important prerequisite for clinical diagnosis and evaluation of liver cancer. For automatic liver segmentation from Computed Tomography (CT) images, we proposed a Multi-scale Feature Extraction and Enhancement U-Net (mfeeU-Net), incorporating Res2Net blocks, Squeeze-and-Excitation (SE) blocks, and Edge Attention (EA) blocks. The Res2Net blocks which are conducive to extracting multi-scale features of the liver were used as the backbone of the encoder, while the SE blocks were also added to the encoder to enhance channel information. The EA blocks were introduced to skip connections between the encoder and the decoder, to facilitate the detection of blurred liver edges where the intensities of nearby organs are close to the liver. The proposed mfeeU-Net was trained and evaluated using a publicly available CT dataset of LiTS2017. The average dice similarity coefficient, intersection-over-union ratio, and sensitivity of the mfeeU-Net for liver segmentation were 95.32%, 91.67%, and 95.53%, respectively, and all these metrics were better than those of U-Net, Res-U-Net, and Attention U-Net. The experimental results demonstrate that the mfeeU-Net can compete with and even outperform recently proposed convolutional neural networks and effectively overcome challenges, such as discontinuous liver regions and fuzzy liver boundaries.

摘要

肝脏的医学图像分割是临床诊断和评估肝癌的重要前提。对于从 CT 图像自动分割肝脏,我们提出了一种多尺度特征提取和增强 U-Net(mfeeU-Net),结合了 Res2Net 块、Squeeze-and-Excitation(SE)块和边缘注意力(EA)块。Res2Net 块有利于提取肝脏的多尺度特征,被用作编码器的骨干,同时也在编码器中添加了 SE 块来增强通道信息。EA 块被引入到编码器和解码器之间的跳过连接中,以方便检测到附近器官的强度接近肝脏的模糊肝脏边缘。所提出的 mfeeU-Net 使用 LiTS2017 的公开 CT 数据集进行了训练和评估。mfeeU-Net 用于肝脏分割的平均骰子相似系数、交并比和灵敏度分别为 95.32%、91.67%和 95.53%,所有这些指标均优于 U-Net、Res-U-Net 和 Attention U-Net。实验结果表明,mfeeU-Net 可以与最近提出的卷积神经网络竞争甚至超越,并且有效地克服了不连续的肝脏区域和模糊的肝脏边界等挑战。

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