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一种用于 DNA 绝对定量分析的三合一微流控液滴数字 PCR 平台。

A three-in-one microfluidic droplet digital PCR platform for absolute quantitative analysis of DNA.

机构信息

The Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an, 710049, P.R. China.

Bioinspired Engineering and Biomechanics Center (BEBC), Xi'an Jiaotong University, Xi'an, 710049, P.R. China.

出版信息

Lab Chip. 2023 May 30;23(11):2521-2530. doi: 10.1039/d3lc00107e.

Abstract

Droplet digital polymerase chain reaction (ddPCR) technology has found widespread applications in the ultrasensitive analysis of nucleic acids, where integrated ddPCR platforms with the capability of sample dispersion, followed by amplification and data analysis, are highly expected. However, current integrated ddPCR platforms are usually limited by either difficultly mass-produced materials or lack of integrated control instruments, restricting their practical application. This paper proposes an integrated three-in-one ddPCR platform with high user-friendliness and practicability, which is composed of an easy-to-use chip and a matching control instrument. The chip was made of thermally resistant and easily mass-produced polycarbonate (PC) material, and the benchtop control instrument was designed to perform droplet generation, amplification, and fluorescence reading. The droplet generation and heating on the chip were well characterized. Finally, the performance of the platform was validated through the analysis of the EGFR L858R mutation in lung cancer. The proposed three-in-one ddPCR platform shows great practicability in ultrasensitive nucleic acid testing. By virtue of its sensitivity, practicability, and cost-effectiveness, the ddPCR can serve as a universal detection platform for monitoring nucleic acid in the fields of tumor diagnosis, pathogen detection, and prenatal diagnosis.

摘要

液滴数字聚合酶链式反应(ddPCR)技术在核酸的超灵敏分析中得到了广泛的应用,人们高度期望具有样本分散、扩增和数据分析功能的集成 ddPCR 平台。然而,目前的集成 ddPCR 平台通常受到难以大规模生产的材料或缺乏集成控制仪器的限制,限制了它们的实际应用。本文提出了一种具有高易用性和实用性的集成三合一 ddPCR 平台,它由一个易于使用的芯片和一个匹配的控制仪器组成。该芯片由耐热且易于大规模生产的聚碳酸酯(PC)材料制成,台式控制仪器设计用于执行液滴生成、扩增和荧光读取。对芯片上的液滴生成和加热进行了很好的表征。最后,通过对肺癌中 EGFR L858R 突变的分析验证了该平台的性能。该三合一 ddPCR 平台在超灵敏核酸检测中具有很大的实用性。ddPCR 凭借其灵敏度、实用性和成本效益,可以作为肿瘤诊断、病原体检测和产前诊断等领域监测核酸的通用检测平台。

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