Ochman Błażej, Mielcarska Sylwia, Kula Agnieszka, Dawidowicz Miriam, Robotycka Julia, Piecuch Jerzy, Szrot Monika, Dzięgielewska-Gęsiak Sylwia, Muc-Wierzgoń Małgorzata, Waniczek Dariusz, Świętochowska Elżbieta
Department of Medical and Molecular Biology, Faculty of Medical Sciences in Zabrze, Medical University of Silesia, 19 Jordana, 41-800 Zabrze, Poland.
Department of Oncological Surgery, Faculty of Medical Sciences in Zabrze, Medical University of Silesia, 35 Ceglana, 40-514 Katowice, Poland.
Curr Issues Mol Biol. 2023 Mar 27;45(4):2781-2797. doi: 10.3390/cimb45040182.
The influence of chitinase-3-like protein 1 (YKL-40 or CHI3L1) expression on the immunological properties of the tumor microenvironment, which may affect the effectiveness of immunotherapy, is currently not sufficiently understood in colorectal cancer (CRC). The aim of this study was to investigate the relationship between YKL-40 expression and the immunological properties of the tumor microenvironment in CRC. We performed in silico analysis, including analysis of immune cell infiltration scores and the immune landscape depending on YKL-40 expression, gene set enrichment analysis (GSEA), and analysis of three Gene Expression Omnibus (GEO) datasets. In 48 CRC tissue homogenates and the surgical margin, we analyzed the expression of YKL-40, MMP8, IL17A, and PD-L1. Moreover, we analyzed the expression of YKL-40 in tissue homogenates retrieved from patients with coexisting diabetes, obesity, and smoking. The expression of YKL-40 was significantly higher in CRC tumor tissue compared to healthy tissue and correlated with MMP-8, IL17A, and PD-L1 expression. In silico analysis revealed an association of YKL-40 with disease recurrence, and GSEA revealed a potential link between elevated YKL-40 expression and immunosuppressive properties of the tumor microenvironment in CRC.
几丁质酶-3样蛋白1(YKL-40或CHI3L1)的表达对肿瘤微环境免疫特性的影响,可能会影响免疫治疗的效果,目前在结直肠癌(CRC)中尚未得到充分了解。本研究的目的是探讨YKL-40表达与CRC肿瘤微环境免疫特性之间的关系。我们进行了生物信息学分析,包括根据YKL-40表达分析免疫细胞浸润评分和免疫格局、基因集富集分析(GSEA)以及对三个基因表达综合数据库(GEO)数据集的分析。在48份CRC组织匀浆和手术切缘中,我们分析了YKL-40、MMP8、IL17A和PD-L1的表达。此外,我们还分析了从合并糖尿病、肥胖和吸烟的患者中获取的组织匀浆中YKL-40的表达。与健康组织相比,CRC肿瘤组织中YKL-40的表达显著更高,且与MMP-8、IL17A和PD-L1的表达相关。生物信息学分析揭示了YKL-40与疾病复发之间的关联,GSEA揭示了CRC中YKL-40表达升高与肿瘤微环境免疫抑制特性之间的潜在联系。