• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用衰减全反射傅里叶变换红外光谱结合机器学习算法和单变量分析进行唾液中寨卡病毒感染的检测:一项概念验证动物研究。

Salivary Detection of Zika Virus Infection Using ATR-FTIR Spectroscopy Coupled with Machine Learning Algorithms and Univariate Analysis: A Proof-of-Concept Animal Study.

作者信息

Oliveira Stephanie Wutke, Cardoso-Sousa Leia, Georjutti Renata Pereira, Shimizu Jacqueline Farinha, Silva Suely, Caixeta Douglas Carvalho, Guevara-Vega Marco, Cunha Thúlio Marquez, Carneiro Murillo Guimarães, Goulart Luiz Ricardo, Jardim Ana Carolina Gomes, Sabino-Silva Robinson

机构信息

Innovation Center in Salivary Diagnostic and Nanobiotechnology, Department of Physiology, Institute of Biomedical Sciences, Federal University of Uberlandia, Uberlandia 38408-100, Brazil.

College of Dentistry, University Center of Triangle (UNITRI), Uberlandia 38411-869, Brazil.

出版信息

Diagnostics (Basel). 2023 Apr 17;13(8):1443. doi: 10.3390/diagnostics13081443.

DOI:10.3390/diagnostics13081443
PMID:37189545
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10137856/
Abstract

Zika virus (ZIKV) diagnosis is currently performed through an invasive, painful, and costly procedure using molecular biology. Consequently, the search for a non-invasive, more cost-effective, reagent-free, and sustainable method for ZIKV diagnosis is of great relevance. It is critical to prepare a global strategy for the next ZIKV outbreak given its devastating consequences, particularly in pregnant women. Attenuated total reflection-Fourier transform infrared (ATR-FTIR) spectroscopy has been used to discriminate systemic diseases using saliva; however, the salivary diagnostic application in viral diseases is unknown. To test this hypothesis, we intradermally challenged interferon-gamma gene knockout C57/BL6 mice with ZIKV (50 µL,105 FFU, = 7) or vehicle (50 µL, = 8). Saliva samples were collected on day three (due to the peak of viremia) and the spleen was also harvested. Changes in the salivary spectral profile were analyzed by Student's test ( < 0.05), multivariate analysis, and the diagnostic capacity by ROC curve. ZIKV infection was confirmed by real-time PCR of the spleen sample. The infrared spectroscopy coupled with univariate analysis suggested the vibrational mode at 1547 cm as a potential candidate to discriminate ZIKV and control salivary samples. Three PCs explained 93.2% of the cumulative variance in PCA analysis and the spectrochemical analysis with LDA achieved an accuracy of 93.3%, with a specificity of 87.5% and sensitivity of 100%. The LDA-SVM analysis showed 100% discrimination between both classes. Our results suggest that ATR-FTIR applied to saliva might have high accuracy in ZIKV diagnosis with potential as a non-invasive and cost-effective diagnostic tool.

摘要

寨卡病毒(ZIKV)的诊断目前是通过采用分子生物学的侵入性、痛苦且昂贵的程序来进行的。因此,寻找一种用于寨卡病毒诊断的非侵入性、更具成本效益、无需试剂且可持续的方法具有重大意义。鉴于寨卡病毒爆发带来的毁灭性后果,尤其是对孕妇而言,为下一次寨卡病毒爆发制定全球战略至关重要。衰减全反射 - 傅里叶变换红外(ATR - FTIR)光谱已被用于通过唾液鉴别全身性疾病;然而,其在病毒性疾病中的唾液诊断应用尚不清楚。为了验证这一假设,我们对干扰素 - γ基因敲除的C57/BL6小鼠进行皮内注射寨卡病毒(50微升,10⁵ FFU,n = 7)或赋形剂(50微升,n = 8)。在第三天(由于病毒血症高峰)收集唾液样本,同时也采集脾脏。通过学生t检验(p < 0.05)、多变量分析以及ROC曲线分析唾液光谱特征的变化。通过脾脏样本的实时PCR确认寨卡病毒感染。红外光谱结合单变量分析表明,1547厘米处的振动模式是鉴别寨卡病毒和对照唾液样本的潜在候选指标。在主成分分析中,三个主成分解释了累积方差的93.2%,线性判别分析的光谱化学分析达到了93.3%的准确率,特异性为87.5%,灵敏度为100%。线性判别分析 - 支持向量机分析显示两类之间的判别率为100%。我们的结果表明,应用于唾液的ATR - FTIR在寨卡病毒诊断中可能具有较高的准确性,有潜力成为一种非侵入性且具成本效益的诊断工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf0/10137856/755cabf01f44/diagnostics-13-01443-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf0/10137856/09b60e5e0138/diagnostics-13-01443-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf0/10137856/3cf195c2c219/diagnostics-13-01443-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf0/10137856/a34096ce1c27/diagnostics-13-01443-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf0/10137856/755cabf01f44/diagnostics-13-01443-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf0/10137856/09b60e5e0138/diagnostics-13-01443-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf0/10137856/3cf195c2c219/diagnostics-13-01443-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf0/10137856/a34096ce1c27/diagnostics-13-01443-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddf0/10137856/755cabf01f44/diagnostics-13-01443-g004.jpg

相似文献

1
Salivary Detection of Zika Virus Infection Using ATR-FTIR Spectroscopy Coupled with Machine Learning Algorithms and Univariate Analysis: A Proof-of-Concept Animal Study.使用衰减全反射傅里叶变换红外光谱结合机器学习算法和单变量分析进行唾液中寨卡病毒感染的检测:一项概念验证动物研究。
Diagnostics (Basel). 2023 Apr 17;13(8):1443. doi: 10.3390/diagnostics13081443.
2
Salivary detection of Chikungunya virus infection using a portable and sustainable biophotonic platform coupled with artificial intelligence algorithms.利用便携式可持续生物光子学平台和人工智能算法检测基孔肯雅热病毒感染的唾液样本。
Sci Rep. 2024 Sep 16;14(1):21546. doi: 10.1038/s41598-024-71889-z.
3
Salivary molecular spectroscopy: A sustainable, rapid and non-invasive monitoring tool for diabetes mellitus during insulin treatment.唾液分子光谱学:胰岛素治疗期间监测糖尿病的一种可持续、快速和非侵入性的监测工具。
PLoS One. 2020 Mar 17;15(3):e0223461. doi: 10.1371/journal.pone.0223461. eCollection 2020.
4
Attenuated Total Reflection-Fourier Transform Infrared (ATR-FTIR) Spectroscopy Analysis of Saliva for Breast Cancer Diagnosis.衰减全反射-傅里叶变换红外光谱(ATR-FTIR)法分析唾液用于乳腺癌诊断
J Oncol. 2020 Feb 10;2020:4343590. doi: 10.1155/2020/4343590. eCollection 2020.
5
Salivary ATR-FTIR Spectroscopy Coupled with Support Vector Machine Classification for Screening of Type 2 Diabetes Mellitus.唾液衰减全反射傅里叶变换红外光谱结合支持向量机分类用于2型糖尿病筛查
Diagnostics (Basel). 2023 Apr 12;13(8):1396. doi: 10.3390/diagnostics13081396.
6
Attenuated Total Reflection-Fourier Transform Infrared (ATR-FTIR) Spectroscopy Analysis of Saliva as a Diagnostic Specimen for Rapid Classification of Oral Squamous Cell Carcinoma Using Chemometrics Methods.衰减全反射-傅里叶变换红外(ATR-FTIR)光谱分析唾液作为诊断标本,用于使用化学计量学方法快速分类口腔鳞状细胞癌。
Cancer Invest. 2024 Nov;42(10):815-826. doi: 10.1080/07357907.2024.2403086. Epub 2024 Oct 1.
7
Salivary Molecular Spectroscopy with Machine Learning Algorithms for a Diagnostic Triage for Amelogenesis Imperfecta.基于机器学习算法的唾液分子光谱学在釉质发育不全诊断分诊中的应用。
Int J Mol Sci. 2024 Aug 30;25(17):9464. doi: 10.3390/ijms25179464.
8
Assessment of Measurement of Salivary Urea by ATR-FTIR Spectroscopy to Screen for CKD.利用衰减全反射傅里叶变换红外光谱法测量唾液尿素评估对 CKD 的筛查作用。
Kidney360. 2021 Dec 21;3(2):357-363. doi: 10.34067/KID.0004362021. eCollection 2022 Feb 24.
9
Saliva based non invasive screening of Oral Submucous Fibrosis using ATR-FTIR spectroscopy.基于ATR-FTIR 光谱的唾液无创筛查口腔黏膜下纤维化。
J Pharm Biomed Anal. 2021 Sep 5;203:114202. doi: 10.1016/j.jpba.2021.114202. Epub 2021 Jun 8.
10
FTIR-based spectrum of salivary exosomes coupled with computational-aided discriminating analysis in the diagnosis of oral cancer.基于傅里叶变换红外光谱的唾液外泌体联合计算辅助判别分析在口腔癌诊断中的应用。
J Cancer Res Clin Oncol. 2019 Mar;145(3):685-694. doi: 10.1007/s00432-018-02827-6. Epub 2019 Jan 3.

引用本文的文献

1
Phycocompounds from Cyanobacteria: Exploring Synergistic Effects with Conventional Anticancer and Antimicrobial Properties.蓝藻中的藻类化合物:探索与传统抗癌和抗菌特性的协同效应。
ACS Omega. 2025 Jun 5;10(23):23957-23980. doi: 10.1021/acsomega.5c03526. eCollection 2025 Jun 17.
2
The Emergence of Saliva as a Diagnostic and Prognostic Tool for Viral Infections.唾液作为病毒感染诊断和预后工具的出现。
Viruses. 2024 Nov 11;16(11):1759. doi: 10.3390/v16111759.
3
Salivary detection of Chikungunya virus infection using a portable and sustainable biophotonic platform coupled with artificial intelligence algorithms.

本文引用的文献

1
Monitoring glucose levels in urine using FTIR spectroscopy combined with univariate and multivariate statistical methods.利用傅里叶变换近红外光谱结合单变量和多变量统计方法监测尿液中的葡萄糖水平。
Spectrochim Acta A Mol Biomol Spectrosc. 2023 Apr 5;290:122259. doi: 10.1016/j.saa.2022.122259. Epub 2022 Dec 17.
2
Attenuated total reflection FTIR dataset for identification of type 2 diabetes using saliva.用于通过唾液识别2型糖尿病的衰减全反射傅里叶变换红外光谱数据集。
Comput Struct Biotechnol J. 2022 Aug 20;20:4542-4548. doi: 10.1016/j.csbj.2022.08.038. eCollection 2022.
3
Noninvasive Diagnostic for COVID-19 from Saliva Biofluid via FTIR Spectroscopy and Multivariate Analysis.
利用便携式可持续生物光子学平台和人工智能算法检测基孔肯雅热病毒感染的唾液样本。
Sci Rep. 2024 Sep 16;14(1):21546. doi: 10.1038/s41598-024-71889-z.
4
Intranasal Immunization for Zika in a Pre-Clinical Model.鼻腔免疫接种寨卡病毒的临床前模型。
Viruses. 2024 May 28;16(6):865. doi: 10.3390/v16060865.
基于傅里叶变换红外光谱和多元分析的唾液生物流体无创诊断 COVID-19。
Anal Chem. 2022 Feb 8;94(5):2425-2433. doi: 10.1021/acs.analchem.1c04162. Epub 2022 Jan 25.
4
Fructose and methylglyoxal-induced glycation alters structural and functional properties of salivary proteins, albumin and lysozyme.果糖和甲基乙二醛诱导的糖化改变了唾液蛋白、白蛋白和溶菌酶的结构和功能特性。
PLoS One. 2022 Jan 21;17(1):e0262369. doi: 10.1371/journal.pone.0262369. eCollection 2022.
5
One-Year Update on Salivary Diagnostic of COVID-19.新型冠状病毒肺炎唾液诊断的一年期最新情况
Front Public Health. 2021 May 21;9:589564. doi: 10.3389/fpubh.2021.589564. eCollection 2021.
6
Ultrarapid On-Site Detection of SARS-CoV-2 Infection Using Simple ATR-FTIR Spectroscopy and an Analysis Algorithm: High Sensitivity and Specificity.利用简单的衰减全反射傅里叶变换(ATR-FTIR)光谱和分析算法快速现场检测 SARS-CoV-2 感染:高灵敏度和特异性。
Anal Chem. 2021 Feb 9;93(5):2950-2958. doi: 10.1021/acs.analchem.0c04608. Epub 2021 Jan 22.
7
Gut microbiota modulation induced by Zika virus infection in immunocompetent mice.寨卡病毒感染诱导免疫功能正常小鼠肠道菌群失调。
Sci Rep. 2021 Jan 14;11(1):1421. doi: 10.1038/s41598-020-80893-y.
8
Spectrochemical differentiation in gestational diabetes mellitus based on attenuated total reflection Fourier-transform infrared (ATR-FTIR) spectroscopy and multivariate analysis.基于衰减全反射傅里叶变换红外光谱(ATR-FTIR)和多元分析的妊娠期糖尿病的光谱化学区分。
Sci Rep. 2020 Nov 6;10(1):19259. doi: 10.1038/s41598-020-75539-y.
9
Evolutions and upcoming on Zika virus diagnosis through an outbreak: A systematic review.寨卡病毒疫情期间诊断方法的演变及未来发展:一项系统综述
Rev Med Virol. 2020 May;30(3):e2105. doi: 10.1002/rmv.2105. Epub 2020 Mar 30.
10
Salivary molecular spectroscopy: A sustainable, rapid and non-invasive monitoring tool for diabetes mellitus during insulin treatment.唾液分子光谱学:胰岛素治疗期间监测糖尿病的一种可持续、快速和非侵入性的监测工具。
PLoS One. 2020 Mar 17;15(3):e0223461. doi: 10.1371/journal.pone.0223461. eCollection 2020.