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通过基于细胞的RNA依赖性RNA聚合酶(RdRp)报告基因检测筛选严重急性呼吸综合征冠状病毒2(SARS-CoV-2)抗病毒药物。

Screening of SARS-CoV-2 antivirals through a cell-based RNA-dependent RNA polymerase (RdRp) reporter assay.

作者信息

Uppal Timsy, Tuffo Kai, Khaiboullina Svetlana, Reganti Sivani, Pandori Mark, Verma Subhash C

机构信息

Department of Microbiology and Immunology, University of Nevada, Reno, NV, 89557, USA.

Nevada State Public Health Laboratory, Reno, NV, 89557, USA.

出版信息

Cell Insight. 2022 Jun 29;1(4):100046. doi: 10.1016/j.cellin.2022.100046. eCollection 2022 Aug.

DOI:10.1016/j.cellin.2022.100046
PMID:37192863
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9239919/
Abstract

COVID-19 (Coronavirus Disease 2019) caused by SARS-CoV-2 (Severe Acute Respiratory Syndrome CoronaVirus-2) continues to pose an international public health threat and thus far, has resulted in greater than 6.4 million deaths worldwide. Vaccines are critical tools to limit COVID-19 spread, but antiviral drug development is an ongoing global priority due to fast-spreading COVID-19 variants that may elude vaccine efficacies. The RNA-dependent RNA polymerase (RdRp) of SARS-CoV-2 is an essential enzyme of viral replication and transcription machinery complex. Therefore, the RdRp is an attractive target for the development of effective anti-COVID-19 therapeutics. In this study, we developed a cell-based assay to determine the enzymatic activity of SARS-CoV-2 RdRp through a luciferase reporter system. The SARS-CoV-2 RdRp reporter assay was validated using known inhibitors of RdRp polymerase, remdesivir along with other anti-virals including ribavirin, penciclovir, rhoifolin, 5'CT, and dasabuvir. Dasabuvir (an FDA-approved drug) exhibited promising RdRp inhibitory activity among these inhibitors. Anti-viral activity of dasabuvir was also tested on the replication of SARS-CoV-2 through infection of Vero E6 cells. Dasabuvir inhibited the replication of SARS-CoV-2, USA-WA1/2020 as well as B.1.617.2 (delta variant) in Vero E6 cells in a dose-dependent manner with EC values 9.47 μM and 10.48 μM, for USA-WA1/2020 and B.1.617.2 variants, respectively. Our results suggest that dasabuvir can be further evaluated as a therapeutic drug for COVID-19. Importantly, this system provides a robust, target-specific, and high-throughput screening compatible (z- and z'-factors of >0.5) platforms that will be a valuable tool for screening SARS-CoV-2 RdRp inhibitors.

摘要

由严重急性呼吸综合征冠状病毒2(SARS-CoV-2)引起的2019冠状病毒病(COVID-19)继续构成国际公共卫生威胁,迄今为止,已在全球导致超过640万人死亡。疫苗是限制COVID-19传播的关键工具,但由于COVID-19变体传播迅速,可能逃避疫苗效力,抗病毒药物研发仍是全球当前的重点。SARS-CoV-2的RNA依赖性RNA聚合酶(RdRp)是病毒复制和转录机制复合体的一种必需酶。因此,RdRp是开发有效抗COVID-19疗法的一个有吸引力的靶点。在本研究中,我们开发了一种基于细胞的检测方法,通过荧光素酶报告系统来测定SARS-CoV-2 RdRp的酶活性。使用已知的RdRp聚合酶抑制剂瑞德西韦以及其他抗病毒药物(包括利巴韦林、喷昔洛韦、根皮苷、5'CT和达沙布韦)对SARS-CoV-2 RdRp报告基因检测进行了验证。达沙布韦(一种美国食品药品监督管理局批准的药物)在这些抑制剂中表现出有前景的RdRp抑制活性。还通过感染Vero E6细胞测试了达沙布韦对SARS-CoV-2复制的抗病毒活性。达沙布韦在Vero E6细胞中以剂量依赖性方式抑制SARS-CoV-2、美国-WA1/2020以及B.1.617.2(德尔塔变体)的复制,对于美国-WA1/2020和B.1.617.2变体,其半数有效浓度(EC)值分别为9.47 μM和10.48 μM。我们的结果表明,达沙布韦可作为COVID-19治疗药物作进一步评估。重要的是,该系统提供了一个强大、靶点特异性且与高通量筛选兼容(z和z'因子>0.5)的平台,这将是筛选SARS-CoV-2 RdRp抑制剂的一个有价值的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eae8/10120286/90c5df63799d/gr6.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eae8/10120286/af2669b4a99c/gr2.jpg
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