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Peptidyl Arginine Deiminase 4 基因转录与多态性对伊朗人群类风湿关节炎易感性的影响。

Implications of Peptidyl Arginine Deiminase 4 gene transcription and polymorphisms in susceptibility to rheumatoid arthritis in an Iranian population.

机构信息

Molecular Medicine Research Center, Research Institute of Basic Medical Sciences, Rafsanjan University of Medical Sciences, Rafsanjan, Iran.

Department of Clinical Biochemistry, School of Medicine, Rafsanjan University of Medical Sciences, Rafsanjan, Iran.

出版信息

BMC Med Genomics. 2023 May 16;16(1):104. doi: 10.1186/s12920-023-01532-9.

Abstract

BACKGROUND

Peptidyl arginine deiminase 4 (PADI4) has been implicated in Rheumatoid arthritis (RA) pathogenesis. Here we aimed to evaluate the association of PADI4 gene rs11203367 and rs1748033 single nucleotide polymorphisms (SNPs) with RA proneness.

METHODS

The mRNA expression of PADI4 was determined in the whole blood samples. The genotyping of PADI4 polymorphisms was conducted using allelic discrimination TaqMan genotyping Real-time PCR.

RESULTS

The alleles and genotypes of rs11203367 polymorphism were not associated with susceptibility to RA risk. The T allele (OR = 1.58, 95%CI: 1.21-2.04, P = 0.0005), TT genotype (OR = 2.79, 95%CI: 1.53-5.06, P = 0.0007), TC genotype (OR = 1.52, 95%CI: 1.04-2.23, P = 0.0291), dominant (OR = 1.72, 95%CI: 1.19-2.47, P = 0.0034) and recessive (OR = 2.19, 95%CI: 1.25-3.82, P = 0.0057) models of rs1748033 SNP were associated with higher risk of RA. There was a significant upregulation of PADI4 mRNA in the RA patients compared to controls. mRNA expression of PADI4 had significantly positive correlation with anti-CCP level (r = 0.37, P = 0.041), RF level (r = 0.39, P = 0.037), and CRP level (r = 0.39, P = 0.024).

CONCLUSION

PADI4 gene rs1748033 SNP was associated with increased RA risk. This polymorphism might affect the RA pathogenesis regardless of impressing the levels of PADI-4 in serum.

摘要

背景

肽基精氨酸脱亚氨酶 4(PADI4)已被牵连到类风湿关节炎(RA)的发病机制中。在这里,我们旨在评估 PADI4 基因 rs11203367 和 rs1748033 单核苷酸多态性(SNP)与 RA 易感性的关联。

方法

在全血样本中测定 PADI4 的 mRNA 表达。使用等位基因鉴别 TaqMan 基因分型实时 PCR 进行 PADI4 多态性的基因分型。

结果

rs11203367 多态性的等位基因和基因型与 RA 易感性风险无关。T 等位基因(OR=1.58,95%CI:1.21-2.04,P=0.0005)、TT 基因型(OR=2.79,95%CI:1.53-5.06,P=0.0007)、TC 基因型(OR=1.52,95%CI:1.04-2.23,P=0.0291)、显性(OR=1.72,95%CI:1.19-2.47,P=0.0034)和隐性(OR=2.19,95%CI:1.25-3.82,P=0.0057)模型与 RA 的更高风险相关。与对照组相比,RA 患者的 PADI4 mRNA 表达明显上调。PADI4 mRNA 的表达与抗 CCP 水平(r=0.37,P=0.041)、RF 水平(r=0.39,P=0.037)和 CRP 水平(r=0.39,P=0.024)呈显著正相关。

结论

PADI4 基因 rs1748033 SNP 与增加的 RA 风险相关。这种多态性可能会影响 RA 的发病机制,而不会影响血清中 PADI-4 的水平。

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